Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OHA86_RS09125 Genome accession   NZ_CP109445
Coordinates   2303311..2304090 (+) Length   259 a.a.
NCBI ID   WP_205044819.1    Uniprot ID   A0A9W4H638
Organism   Streptomyces sp. NBC_01477     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2298311..2309090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA86_RS09110 (OHA86_09150) - 2298475..2299080 (-) 606 WP_329174000.1 YdbC family protein -
  OHA86_RS09115 (OHA86_09155) - 2299266..2302145 (-) 2880 WP_329174002.1 vitamin B12-dependent ribonucleotide reductase -
  OHA86_RS09120 (OHA86_09160) nrdR 2302262..2302774 (-) 513 WP_329174004.1 transcriptional regulator NrdR -
  OHA86_RS09125 (OHA86_09165) dinR/lexA 2303311..2304090 (+) 780 WP_205044819.1 transcriptional repressor LexA Regulator
  OHA86_RS09130 (OHA86_09170) - 2304161..2306131 (-) 1971 WP_329174008.1 ATP-dependent DNA helicase -
  OHA86_RS09135 (OHA86_09175) - 2306273..2306782 (+) 510 WP_329174010.1 FHA domain-containing protein -
  OHA86_RS09140 (OHA86_09180) - 2306794..2307987 (+) 1194 WP_329174011.1 serine/threonine-protein kinase -
  OHA86_RS09145 (OHA86_09185) - 2307971..2308612 (-) 642 WP_329174013.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27998.77 Da        Isoelectric Point: 7.4755

>NTDB_id=676415 OHA86_RS09125 WP_205044819.1 2303311..2304090(+) (dinR/lexA) [Streptomyces sp. NBC_01477]
MTTAAESATATLTAHDRSPDRIGPLDVMNEENSPKPARSLPGRPPGIRADSSGLTERQRRVIEVIRDSVQRRGYPPSMRE
IGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRASDAGHPQPTDTSGKPSASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKRDNGHVWLLPHNAAYQP
IPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=676415 OHA86_RS09125 WP_205044819.1 2303311..2304090(+) (dinR/lexA) [Streptomyces sp. NBC_01477]
GTGACCACCGCCGCAGAGAGCGCCACAGCGACATTGACCGCACATGACCGCTCCCCGGATCGAATCGGCCCGTTGGACGT
GATGAACGAAGAGAACAGTCCGAAGCCCGCGCGCTCGCTTCCCGGACGGCCCCCGGGTATTCGCGCCGACAGCTCCGGCC
TCACCGAACGCCAGCGCAGGGTCATCGAAGTCATCAGGGATTCGGTACAGCGCCGCGGATACCCCCCGTCCATGCGTGAA
ATCGGCCAGGCGGTGGGGCTGTCCAGTACGTCCTCGGTCGCCCATCAGCTGATGGCACTCGAGCGAAAGGGATTCCTGCG
CCGCGACCCGCACCGGCCGCGGGCGTACGAGGTGCGCGCCTCGGACGCCGGGCATCCCCAGCCGACCGACACCTCGGGCA
AGCCGTCCGCGTCCTATGTGCCGCTCGTCGGGCGGATCGCCGCGGGCGGACCGATCCTCGCCGAGGAATCGGTCGAGGAC
GTCTTCCCGCTGCCCCGCCAGCTCGTGGGTGACGGCGAGCTGTTCGTGCTCAAGGTGGTCGGCGACTCGATGATCGAGGC
AGCCATCTGCGACGGGGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTCGCCGCCATGCTCG
ACGGCGAAGCCACGGTGAAGCGCTTCAAGCGGGACAACGGGCATGTATGGCTGCTGCCGCACAATGCCGCCTACCAGCCC
ATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTGGTGGCGGTGCTGCGCAGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(52-115)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W4H638

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.238

81.081

0.367