Detailed information NTG0676283

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: MRO13_RS02680
• Genome accession: NZ_CP095311
• Coordinates: 572695..576033 (-)
• Length: 1112 a.a.
• NCBI ID: WP_217520912.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 20CO01TI02
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 567695..581033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRO13_RS02665 (MRO13_02665)	-	568042..569067 (-)	1026	WP_004394192.1	ABC transporter permease	-
MRO13_RS02670 (MRO13_02670)	-	569070..570056 (-)	987	WP_004394190.1	ABC transporter permease	-
MRO13_RS02675 (MRO13_02675)	-	570277..571827 (-)	1551	WP_350940528.1	ABC transporter substrate-binding protein	-
MRO13_RS02680 (MRO13_02680)	chiS	572695..576033 (-)	3339	WP_217520912.1	response regulator	Regulator
MRO13_RS02685 (MRO13_02685)	rsmC	576289..577311 (-)	1023	WP_004394185.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
MRO13_RS02690 (MRO13_02690)	-	577377..578462 (-)	1086	WP_350940098.1	AI-2E family transporter	-
MRO13_RS02695 (MRO13_02695)	hemL	578904..580196 (-)	1293	WP_350940100.1	glutamate-1-semialdehyde 2,1-aminomutase	-

Sequence

Protein

• Length: 1112 a.a.
• Molecular weight: 125857.24 Da
• Isoelectric Point: 6.4374

>NTDB_id=676283 MRO13_RS02680 WP_217520912.1 572695..576033(-) (chiS) [Vibrio metschnikovii strain 20CO01TI02]
MLAFLAVSLTPLTVTALFFLHSHSKDLQEQSTSHLISVRDTKQQQIIDYLSAKESEVMGFVRSELAYASGGRFYGLVNAF
QRLGENIEQARLHAQQRYIPGSGDQIRTSILPKSSSYAGSERYRLLHKRYHASYLELLKRSDFDDILIVDLQGNVVYSIF
KHAYYGTNLLSDNPQNSPLGRTFQQLEQQVTEQRKVNEDYTPVIVSDFAEYNGRQYAWMGAPIIQQGYLHSYAMFRLPNN
GITKLIADHNQDSAKRTLLVGQDHRSRTLAYQQADVDTSSDVIQLALNGSRSVTTYENTLGEKQIAAYAPIHLQNLNWAL
VVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITLPLLKLTWAAERVSAGDLDQPIIHTQRRDEIGRLAVS
FERMQRSIREKIQLIKSQNIELEDNIQLIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALTSGANGPISAAH
RYQLDIIISSGQRLANLVDDLLDYHKMRYGHLDIETQAVNLSNATRMVLELSHHLLGKKTLRIINQIADQPLWVSADAQR
LEQVLYNLIGNAIKYTSEGKIVISATPMEHQVRIQVVDTGQGIPAEQLEHIFEPLIQAGHDSSRYRQGAGLGLTISRQLI
ELMQGSLYVSSQPMVGTTFSFTLPLATSQQIAQAQRSQIAHFQAPELSSIDDLEQLQQPENPQGPLLLIADDEPVNLRVL
DSFLRLEGYRVRTALDGHEVIEAIAKEKPELLLLDVMMPGMSGYQVCEQLREQYDHAQLPIIMLTALTQSDDRIRGFAAG
ANDYLSKPFNKQELAARIKAHLSASKAEQRRIENAQLQKELKQRAMVEASLLETQGRLLEQLDSAPEAILCLREDNKIRF
ANEAACKLFKRSQDQLKRSNAEELIAPKYLLVEQEHYCGNIDIYIDDVRQHLSADVLRLPEGSSFKTMYIFNVGGNLNAN
RIHQLETAVDALSSYAFAGDKDKLQQLKELGGEFTRIAEKVAGETPSKQALMRAVLVDAMTSALDYWEKVTGQSKFTFAE
QSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCQEQGPERTYIEVQRDKLQQLLTSD

Nucleotide

• Length: 3339 bp

>NTDB_id=676283 MRO13_RS02680 WP_217520912.1 572695..576033(-) (chiS) [Vibrio metschnikovii strain 20CO01TI02]
ATGTTAGCGTTTCTGGCGGTCAGCCTCACTCCGCTAACGGTAACAGCCTTGTTCTTTCTTCATTCACACAGTAAAGACTT
ACAAGAACAAAGTACCTCACATCTCATTTCTGTACGAGATACCAAGCAGCAACAAATTATCGATTATCTCAGCGCCAAAG
AGTCTGAAGTGATGGGATTTGTTCGTTCAGAACTTGCCTATGCCAGCGGTGGACGTTTTTACGGTTTGGTCAATGCCTTT
CAACGATTAGGGGAAAATATTGAGCAAGCGCGTCTGCACGCTCAACAACGCTATATCCCCGGTTCTGGCGATCAAATCAG
AACCTCTATTTTACCTAAATCAAGTAGTTACGCAGGTAGTGAACGTTATCGTCTACTGCACAAACGTTACCATGCAAGTT
ATCTAGAGCTACTGAAACGGTCTGACTTTGACGATATTCTGATCGTCGATCTACAGGGTAATGTGGTCTATTCAATTTTC
AAGCATGCGTATTATGGCACGAATCTACTCAGCGATAATCCGCAGAACTCACCTCTAGGACGAACCTTCCAGCAACTGGA
ACAGCAAGTGACTGAGCAACGTAAGGTCAATGAAGACTATACCCCTGTCATTGTGTCTGATTTTGCTGAATACAATGGAC
GCCAATATGCTTGGATGGGCGCACCCATTATTCAACAAGGCTATCTTCACAGTTATGCCATGTTCCGTCTGCCGAATAAT
GGCATCACCAAATTAATTGCCGATCATAATCAAGACTCAGCCAAAAGGACGTTATTGGTTGGCCAAGATCACCGTTCTCG
TACGCTGGCTTATCAACAAGCCGATGTGGATACCAGCAGTGACGTGATTCAGTTGGCACTCAATGGCTCGCGCTCGGTCA
CAACCTATGAGAATACGCTCGGTGAAAAACAGATTGCCGCTTATGCGCCGATTCATTTGCAAAATCTCAATTGGGCTTTA
GTTGTCGAACTCCCTGAAAAAGAAGCCTTTGCCCGAGTAAGACAACTGGAAAAATTATTTATTTTCGCGATGTTAACGGC
GATCATCTTAGTGGTCATCGCTTCTCACTATCTCTCTAACTTTATTACTCTCCCTTTACTCAAACTCACTTGGGCAGCAG
AACGCGTCTCCGCCGGTGATTTGGATCAACCGATCATTCATACTCAACGGCGCGATGAAATTGGCCGTTTGGCAGTTAGT
TTTGAAAGAATGCAACGCTCGATCCGTGAAAAAATCCAACTGATCAAATCACAAAATATTGAGTTAGAAGATAATATCCA
GCTGATTCGTAAACAAAATGATGAACTGCAATTAGCCAACAAACTTAAAGATGAGTTTTTAGCGACCACATCACATGAGC
TACGTACTCCATTACACGGCATGATAGGCATTGCTGAAGCTTTGACTTCCGGTGCTAATGGGCCAATCAGTGCAGCCCAC
CGCTATCAACTCGACATTATTATCAGTAGCGGTCAACGTCTTGCCAATCTTGTTGATGATTTACTCGATTATCACAAGAT
GCGTTATGGTCATCTCGATATCGAAACTCAAGCCGTTAATCTCTCCAATGCGACCAGAATGGTGCTTGAGCTGTCTCATC
ATCTGCTCGGTAAAAAAACACTACGGATTATTAACCAAATTGCCGATCAGCCATTATGGGTATCGGCTGATGCTCAGCGA
CTTGAACAGGTACTGTATAACCTGATTGGTAATGCGATTAAATATACCTCTGAAGGAAAAATTGTTATTTCAGCCACCCC
AATGGAGCATCAAGTTAGAATCCAAGTGGTCGATACTGGACAAGGCATTCCTGCTGAGCAATTGGAGCATATTTTTGAAC
CGCTAATTCAAGCCGGGCACGATAGCAGCCGTTATCGTCAAGGTGCGGGTTTAGGATTGACGATTAGCCGCCAATTAATT
GAATTAATGCAAGGCTCCTTGTACGTCAGTAGCCAGCCGATGGTCGGTACCACCTTTAGTTTTACGCTGCCACTCGCGAC
TTCACAACAAATTGCTCAAGCGCAACGCAGTCAAATTGCTCATTTTCAAGCACCAGAATTATCCTCGATTGACGATCTCG
AACAGCTGCAACAACCAGAAAACCCACAAGGTCCTCTACTGCTGATTGCCGATGATGAGCCGGTTAACCTGCGTGTATTA
GACAGTTTTTTACGTCTAGAAGGCTATCGTGTCCGAACAGCACTCGATGGCCATGAGGTTATTGAAGCGATTGCCAAAGA
GAAACCTGAACTTTTACTGCTCGATGTGATGATGCCCGGCATGAGTGGTTATCAGGTCTGTGAGCAATTAAGAGAGCAGT
ACGATCATGCGCAACTACCAATTATAATGCTAACCGCATTAACCCAAAGTGATGATCGGATCAGAGGCTTTGCCGCTGGC
GCCAATGACTATTTATCAAAACCTTTTAATAAACAAGAACTCGCCGCTCGAATTAAAGCTCACTTAAGCGCCAGTAAAGC
AGAGCAACGTCGTATTGAAAATGCTCAACTTCAAAAAGAGCTCAAACAACGAGCGATGGTCGAAGCCAGTTTACTCGAAA
CTCAAGGCCGACTATTAGAGCAACTGGATTCAGCGCCAGAAGCGATTTTGTGTTTACGAGAAGACAATAAAATCCGCTTT
GCCAATGAGGCGGCCTGTAAGCTATTTAAACGCAGCCAAGATCAACTCAAACGCTCTAACGCCGAAGAGTTGATTGCCCC
TAAATATTTACTGGTTGAGCAAGAGCATTATTGCGGGAACATCGATATTTATATCGATGATGTCAGACAACATCTCTCCG
CTGATGTGCTTCGCTTACCGGAAGGAAGCAGTTTTAAAACAATGTACATTTTTAATGTCGGTGGAAATCTTAACGCCAAT
CGTATCCACCAACTAGAAACCGCCGTCGACGCGTTATCAAGCTATGCTTTTGCTGGTGATAAAGACAAACTTCAGCAGTT
AAAAGAGCTAGGAGGTGAATTTACTCGCATCGCAGAAAAAGTGGCCGGAGAAACCCCATCAAAACAGGCGTTAATGCGCG
CCGTGTTGGTTGATGCGATGACGAGCGCTCTCGACTACTGGGAAAAAGTCACAGGACAAAGTAAGTTTACGTTTGCTGAA
CAAAGCGGATTATGGCGCGTCTATTTAGACCGTAGTACTTTGCAAACTCGAACATTGGATAAGTACTTACGTATTGAAAC
GCTACCCAAAACGCCTCGCTGGCGCACGGTGCTGAACTCACTTGACTACATATTGGAACACTGTCAGGAGCAAGGCCCAG
AGCGAACCTACATCGAAGTACAACGAGATAAATTACAGCAATTGTTAACGAGCGATTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (860-908)

• His Kinase A (phospho-acceptor) domain (HisKA) (443-508)

• Response regulator receiver domain (Response_reg) (708-819)

• HAMP domain (HAMP) (358-410)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (557-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	80.396	100	0.804