Detailed information NTG0676271

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MRO13_RS01220
• Genome accession: NZ_CP095311
• Coordinates: 266381..267382 (+)
• Length: 333 a.a.
• NCBI ID: WP_350939989.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 20CO01TI02
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 261381..272382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRO13_RS01200 (MRO13_01200)	metJ	261508..261825 (+)	318	WP_040903918.1	met regulon transcriptional regulator MetJ	-
MRO13_RS01205 (MRO13_01205)	-	261893..263179 (-)	1287	WP_170904276.1	malic enzyme-like NAD(P)-binding protein	-
MRO13_RS01210 (MRO13_01210)	rpmE	263403..263621 (-)	219	WP_004394441.1	50S ribosomal protein L31	-
MRO13_RS01215 (MRO13_01215)	priA	263867..266068 (+)	2202	WP_154169962.1	primosomal protein N'	-
MRO13_RS01220 (MRO13_01220)	cytR	266381..267382 (+)	1002	WP_350939989.1	DNA-binding transcriptional regulator CytR	Regulator
MRO13_RS01225 (MRO13_01225)	-	267503..268045 (+)	543	WP_040903920.1	SPOR domain-containing protein	-
MRO13_RS01230 (MRO13_01230)	hslV	268234..268788 (+)	555	WP_004394445.1	ATP-dependent protease subunit HslV	-
MRO13_RS01235 (MRO13_01235)	hslU	268827..270158 (+)	1332	WP_158145001.1	HslU--HslV peptidase ATPase subunit	-
MRO13_RS01240 (MRO13_01240)	-	270245..271162 (+)	918	WP_158138979.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MRO13_RS01245 (MRO13_01245)	rraA	271238..271756 (+)	519	WP_154169966.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36663.29 Da
• Isoelectric Point: 6.6351

>NTDB_id=676271 MRO13_RS01220 WP_350939989.1 266381..267382(+) (cytR) [Vibrio metschnikovii strain 20CO01TI02]
MATMKDVAQLAGVSTATVSRALMNPEKVSTTTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVVIVPDICDPYYTEIIRG
IEDVAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGADLPFDVSKAEQKNLPPMVMACEYTPELELPTVHIDN
LTSAFEAVNYLTQMGHKKIAQISGPVGAVLCEFRQQGYQQALRRAGLVKNPTYTVVGDFSFESGAKAVRQLLALSEPPSA
IFCHNDAMAIGAMQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTICQPRYEIGRQTMLMMLELLRGRDVQAGSRLLE
THLVVRSSAAPPR

Nucleotide

• Length: 1002 bp

>NTDB_id=676271 MRO13_RS01220 WP_350939989.1 266381..267382(+) (cytR) [Vibrio metschnikovii strain 20CO01TI02]
ATGGCGACAATGAAGGACGTTGCCCAGTTGGCAGGTGTCTCTACCGCGACGGTATCTCGTGCGTTGATGAATCCTGAGAA
AGTATCCACCACCACTCGTAAACGAGTGGAAGAAGCGGTACTTGAAGCTGGCTACTCCCCCAACTCTTTAGCGCGAAATC
TGCGCCGTAATGAATCAAAAACCATTGTGGTGATCGTGCCCGATATTTGTGACCCTTATTACACCGAGATCATTCGTGGT
ATCGAAGATGTGGCGATGGAGCATGGGTATTTGGTGCTGCTGGGTGACAGTGGTCAACAAAAGAAGCGTGAAAGCTCGTT
TGTGAACCTAGTCTTCACCAAGCAAGCCGACGGTATGTTATTGCTTGGTGCTGATCTGCCGTTTGATGTCAGTAAAGCGG
AACAGAAAAATCTGCCACCGATGGTGATGGCCTGTGAATATACCCCGGAGTTAGAACTGCCGACGGTACATATTGATAAC
CTTACCTCAGCATTTGAGGCGGTGAACTACCTCACTCAGATGGGACATAAAAAAATTGCTCAAATCAGCGGGCCAGTAGG
TGCTGTGTTGTGTGAATTTCGTCAGCAAGGTTACCAGCAAGCACTGCGTAGAGCTGGATTGGTGAAAAATCCAACCTATA
CCGTTGTTGGTGACTTCTCTTTTGAATCCGGTGCTAAAGCGGTACGACAGTTATTAGCACTGTCTGAGCCACCAAGTGCG
ATTTTTTGTCATAATGACGCGATGGCGATTGGGGCAATGCAAGAGGCGAAACGCTTAGGTTTACGAGTTCCGCAAGATTT
ATCCGTTGTGGGGTTTGATGATATTCAGTTTGCTCAGTATTGCGATCCACCGTTAACGACGATTTGCCAGCCACGCTATG
AAATTGGCCGACAAACGATGTTGATGATGCTTGAATTACTGCGAGGTCGAGATGTTCAGGCTGGATCACGGTTGTTAGAA
ACTCATCTGGTAGTGAGATCCAGCGCCGCGCCGCCAAGGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.554	99.7	0.883
cytR	Vibrio parahaemolyticus RIMD 2210633	87.087	100	0.871