Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG352_RS25020 Genome accession   NZ_CP109435
Coordinates   5515187..5516311 (-) Length   374 a.a.
NCBI ID   WP_329219929.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01485     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5510187..5521311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG352_RS24995 (OG352_25005) cseB 5510551..5511252 (-) 702 WP_329219924.1 two-component system response regulator CseB -
  OG352_RS25000 (OG352_25010) - 5511535..5512203 (-) 669 WP_329219925.1 hypothetical protein -
  OG352_RS25005 (OG352_25015) - 5512188..5512730 (-) 543 WP_329219926.1 SigE family RNA polymerase sigma factor -
  OG352_RS25010 (OG352_25020) - 5513030..5513962 (-) 933 WP_329219927.1 A/G-specific adenine glycosylase -
  OG352_RS25015 (OG352_25025) - 5514255..5515103 (+) 849 WP_329219928.1 hypothetical protein -
  OG352_RS25020 (OG352_25030) disA 5515187..5516311 (-) 1125 WP_329219929.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG352_RS25025 (OG352_25035) radA/sms 5516393..5517802 (-) 1410 WP_329219930.1 DNA repair protein RadA Machinery gene
  OG352_RS25030 (OG352_25040) - 5518080..5519819 (+) 1740 WP_329219931.1 hypothetical protein -
  OG352_RS25035 (OG352_25045) - 5520016..5520858 (-) 843 WP_329223952.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40207.97 Da        Isoelectric Point: 5.0127

>NTDB_id=676167 OG352_RS25020 WP_329219929.1 5515187..5516311(-) (disA) [Streptomyces sp. NBC_01485]
MAANDRAAAPGKSGGSSRAEGLMRAALSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALTHAELLELSTVARALGYTGSPEALDTAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=676167 OG352_RS25020 WP_329219929.1 5515187..5516311(-) (disA) [Streptomyces sp. NBC_01485]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCCGCGCCGAGGGCTTGATGCGTGCCGCGCT
GAGCGCGGTGGCTCCGGGCACGGCCCTGCGCGACGGCCTCGAGCGGGTGCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGACGATGTGCACGGGCGGATTCGTCCTGGACGTCGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTGCGCGCCGGCGTCCAACTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGCGTCAGCAAGCAGGTGAGCTTCACGG
TCGTGTCGGTCTCCCAGTCCATGCGCCTGATCGCCCTGTACGTCGACGGACAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCAGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGGCGGCTGCTCGCCCTCCAACTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAACGCGAACTGGTGGTCCGGGACTACGTTCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGAAGA
GGCGCTGTACGAGCTGGACGCGCTCACCCACGCCGAACTCCTCGAACTGTCCACGGTGGCCCGCGCGCTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACACGGCGGTCTCCCCGCGCGGCTTCCGCCTCCTCGCGAAGGTGCCGCGCCTCCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCAAGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGACTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436