Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MUY33_RS07950 Genome accession   NZ_CP095170
Coordinates   1670329..1670955 (+) Length   208 a.a.
NCBI ID   WP_008499926.1    Uniprot ID   A0AAX1WHW5
Organism   Enterobacter roggenkampii strain K666     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1665329..1675955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUY33_RS07930 (MUY33_07930) - 1665728..1667488 (-) 1761 WP_023327040.1 Lon protease family protein -
  MUY33_RS07935 (MUY33_07935) matP 1667675..1668127 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  MUY33_RS07940 (MUY33_07940) ompA 1668192..1669247 (-) 1056 WP_008499928.1 porin OmpA -
  MUY33_RS07945 (MUY33_07945) sulA 1669602..1670111 (-) 510 WP_032637628.1 SOS-induced cell division inhibitor SulA -
  MUY33_RS07950 (MUY33_07950) sxy/tfoX 1670329..1670955 (+) 627 WP_008499926.1 TfoX/Sxy family DNA transformation protein Regulator
  MUY33_RS07955 (MUY33_07955) yccS 1670912..1673074 (-) 2163 WP_032651202.1 YccS family putative transporter -
  MUY33_RS07960 (MUY33_07960) - 1673094..1673540 (-) 447 WP_008499924.1 YccF domain-containing protein -
  MUY33_RS07965 (MUY33_07965) helD 1673664..1675718 (+) 2055 WP_032651204.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23885.49 Da        Isoelectric Point: 9.6439

>NTDB_id=675911 MUY33_RS07950 WP_008499926.1 1670329..1670955(+) (sxy/tfoX) [Enterobacter roggenkampii strain K666]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=675911 MUY33_RS07950 WP_008499926.1 1670329..1670955(+) (sxy/tfoX) [Enterobacter roggenkampii strain K666]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCAGTGGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCCGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGTTGGAAGGAGCTATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
CCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567