Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MUY30_RS07760 Genome accession   NZ_CP095165
Coordinates   1658489..1659115 (+) Length   208 a.a.
NCBI ID   WP_048962070.1    Uniprot ID   A0AAU9BLQ2
Organism   Enterobacter roggenkampii strain K475-2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1653489..1664115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUY30_RS07740 (MUY30_07740) - 1653888..1655648 (-) 1761 WP_023343697.1 Lon protease family protein -
  MUY30_RS07745 (MUY30_07745) matP 1655835..1656287 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  MUY30_RS07750 (MUY30_07750) ompA 1656352..1657407 (-) 1056 WP_126287646.1 porin OmpA -
  MUY30_RS07755 (MUY30_07755) sulA 1657762..1658271 (-) 510 WP_032637628.1 SOS-induced cell division inhibitor SulA -
  MUY30_RS07760 (MUY30_07760) sxy/tfoX 1658489..1659115 (+) 627 WP_048962070.1 TfoX/Sxy family DNA transformation protein Regulator
  MUY30_RS07765 (MUY30_07765) yccS 1659072..1661234 (-) 2163 WP_126287645.1 YccS family putative transporter -
  MUY30_RS07770 (MUY30_07770) - 1661254..1661700 (-) 447 WP_023335159.1 YccF domain-containing protein -
  MUY30_RS07775 (MUY30_07775) helD 1661824..1663878 (+) 2055 WP_126287644.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23901.49 Da        Isoelectric Point: 9.6030

>NTDB_id=675889 MUY30_RS07760 WP_048962070.1 1658489..1659115(+) (sxy/tfoX) [Enterobacter roggenkampii strain K475-2]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLYEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=675889 MUY30_RS07760 WP_048962070.1 1658489..1659115(+) (sxy/tfoX) [Enterobacter roggenkampii strain K475-2]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCAGTGGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
ATGAAGCTGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
CCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567