Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG407_RS23420 Genome accession   NZ_CP109416
Coordinates   5272723..5273781 (+) Length   352 a.a.
NCBI ID   WP_366497643.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01515     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5267723..5278781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG407_RS23405 (OG407_23375) - 5268410..5269267 (+) 858 WP_405860865.1 hypothetical protein -
  OG407_RS23410 (OG407_23380) - 5269278..5270978 (-) 1701 WP_405860867.1 BACON domain-containing protein -
  OG407_RS23415 (OG407_23385) radA/sms 5271177..5272586 (+) 1410 WP_405860869.1 DNA repair protein RadA Machinery gene
  OG407_RS23420 (OG407_23390) disA 5272723..5273781 (+) 1059 WP_366497643.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG407_RS23425 (OG407_23395) - 5273814..5274629 (-) 816 WP_405860871.1 hypothetical protein -
  OG407_RS23430 (OG407_23400) - 5274834..5275778 (+) 945 WP_405860873.1 A/G-specific adenine glycosylase -
  OG407_RS23435 (OG407_23405) - 5276120..5276659 (+) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG407_RS23440 (OG407_23410) - 5276647..5277363 (+) 717 WP_403605484.1 hypothetical protein -
  OG407_RS23445 (OG407_23415) cseB 5277533..5278240 (+) 708 WP_328680456.1 two-component system response regulator CseB -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38050.67 Da        Isoelectric Point: 4.9024

>NTDB_id=675780 OG407_RS23420 WP_366497643.1 5272723..5273781(+) (disA) [Streptomyces sp. NBC_01515]
MRASLSAAAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLRELCKLDGGIVVSSDLSKILRAG
VQLVPDPNIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSTVVQRLEMVRLIATEIAEYVVELGTDGRLLALQLEELIAGVEPERELVVRDYVPEPTAKRS
RTVNEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAIIDRLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=675780 OG407_RS23420 WP_366497643.1 5272723..5273781(+) (disA) [Streptomyces sp. NBC_01515]
ATGCGCGCCTCATTGAGCGCCGCGGCCCCTGGCACGGCCCTGCGCGACGGCCTGGAGAGAATCCTCCGCGGCAACACGGG
CGGCCTCATCGTGCTCGGTTCCGACAAGACCGTAGAAGCGATGTGCACAGGCGGTTTCATCCTGGACGTGGAGTTCACGG
CCACGCGCCTACGAGAACTCTGCAAGCTGGACGGCGGCATCGTCGTCTCCTCGGACCTCTCCAAGATCCTTCGAGCAGGC
GTCCAGCTGGTCCCCGACCCCAACATCCCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGAGTGAGCAAACA
GGTCTCCTTCCCGGTGGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCCCTCTACGTAGACGGCCAACGCCGCGTACTGG
AGGACTCGGCGGCGATCCTGTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTG
GCGGGAACGCTGTCGGCCCTGGAGATCGAGGACCTGGTGACGGTCCGAGACGTATCAACCGTGGTCCAACGCCTCGAAAT
GGTCCGCCTGATCGCGACCGAGATCGCCGAATACGTCGTGGAGCTCGGCACGGACGGCCGCCTGCTCGCCCTCCAGCTGG
AGGAGTTGATCGCGGGCGTGGAACCGGAACGCGAACTGGTAGTCCGCGACTACGTCCCCGAGCCCACGGCCAAACGCTCC
CGCACGGTGAACGAAGCCCTGGCCGAACTGGACGCCCTCTCCCACGCGGAGCTCCTCGAACTCCCCACCGTGGCCCGCGC
GTTGGGCTACACCGGCTCCCCCGAGGCCCTCGACTCGGCGGTGTCCCCCCGAGGCTTCCGCCTCCTGGCCAAGGTCCCGC
GCCTCCCCGGCGCGATCATCGACCGCCTGGTGGAGCACTTCGGAGGCCTGCAGAAACTCCTGGCGGCAAGCGTCGACGAC
CTGCAGACAGTGGACGGCGTAGGGGAAGCAAGGGCACGCAGCGTCCGAGAGGGCCTCTCCCGCCTGGCGGAGTCCTCCAT
CCTCGAACGCTACGTGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)

Helix-hairpin-helix motif (HHH_2)

(302-337)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.376

98.295

0.446