Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MU411_RS16995 Genome accession   NZ_CP095150
Coordinates   3455867..3456463 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain Iso00073     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3450867..3461463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU411_RS16980 helD 3451075..3453129 (-) 2055 WP_004176653.1 DNA helicase IV -
  MU411_RS16985 - 3453254..3453700 (+) 447 WP_002898425.1 YccF domain-containing protein -
  MU411_RS16990 yccS 3453718..3455853 (+) 2136 WP_004213263.1 YccS family putative transporter -
  MU411_RS16995 sxy/tfoX 3455867..3456463 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  MU411_RS17000 sulA 3456812..3457321 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  MU411_RS17005 ompA 3457674..3458744 (+) 1071 WP_002898408.1 porin OmpA -
  MU411_RS17010 matP 3458876..3459328 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  MU411_RS17015 - 3459514..3461271 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=675750 MU411_RS16995 WP_004179217.1 3455867..3456463(-) (sxy/tfoX) [Klebsiella pneumoniae strain Iso00073]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=675750 MU411_RS16995 WP_004179217.1 3455867..3456463(-) (sxy/tfoX) [Klebsiella pneumoniae strain Iso00073]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTATTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51