Detailed information NTG0675609

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG422_RS09800
• Genome accession: NZ_CP109397
• Coordinates: 2204664..2205947 (-)
• Length: 427 a.a.
• NCBI ID: WP_143940901.1
• Uniprot ID: A0A553ZPS4
• Organism: Streptomyces sp. NBC_01525
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2199664..2210947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG422_RS09785 (OG422_09790)	-	2199703..2200884 (+)	1182	WP_405747714.1	hypothetical protein	-
OG422_RS09790 (OG422_09795)	-	2200850..2203468 (-)	2619	WP_405742016.1	valine--tRNA ligase	-
OG422_RS09795 (OG422_09800)	-	2203607..2204587 (+)	981	WP_405742018.1	hypothetical protein	-
OG422_RS09800 (OG422_09805)	clpX	2204664..2205947 (-)	1284	WP_143940901.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG422_RS09805 (OG422_09810)	clpP	2206105..2206782 (-)	678	WP_143940900.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG422_RS09810 (OG422_09815)	clpP	2206849..2207451 (-)	603	WP_185993847.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG422_RS09815 (OG422_09820)	tig	2207739..2209121 (-)	1383	WP_143940898.1	trigger factor	-
OG422_RS09830 (OG422_09835)	-	2209792..2210178 (+)	387	WP_143940897.1	arsenate reductase family protein	-
OG422_RS09835 (OG422_09840)	-	2210272..2210466 (-)	195	WP_143940896.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46658.43 Da
• Isoelectric Point: 4.9413

>NTDB_id=675609 OG422_RS09800 WP_143940901.1 2204664..2205947(-) (clpX) [Streptomyces sp. NBC_01525]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQDP
AKKALSVAVYNHYKRVQAGENGGGRGDEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLDKIIEARSGAKGIGFGATIRSKREIESKDQLKDVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
TLLQILVEPRNALVKQYKRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVITE
DVVHSNVNPTLVPRSRGESGEPHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=675609 OG422_RS09800 WP_143940901.1 2204664..2205947(-) (clpX) [Streptomyces sp. NBC_01525]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGTCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAGCTGGCCGAGACCT
CCGAGGTGCGCTGGGAGGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCAACGGCTACGTCGTCGGCCAGGATCCC
GCCAAGAAGGCCCTCTCGGTGGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCGGCGGCCGCGGCGA
TGAGGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGACCC
TCGCCCGGATGCTGAACGTCCCGTTCGCCTTCGCGGACGCCACCGCCCTCACCGAGGCCGGTTACGTCGGCGAGGACGTC
GAGAACATCCTGCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACGGGGATCATCTACATCGACGA
GATCGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGACAAGATCATCGAGGCGCGGTCCGGCGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCGAAGGACCAGCTCAAGGACGTCATGCCGGAGG
ACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGCGAG
ACGCTGCTGCAAATCCTCGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACAAGCGCCTCTTCGAACTCGACGGCGTGGA
GCTGGACTTCGACCGCCCGGCACTGGAGGCCATCGCCGACCAGGCCATCCTGCGCGGCACCGGCGCCCGCGGTCTGCGCG
CCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACCGAG
GACGTCGTGCACTCCAACGTCAACCCGACCCTGGTGCCGCGCAGCCGCGGCGAGTCGGGCGAACCGCACGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

3D structure

• AlphaFold DB: A0A553ZPS4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.095	93.911	0.583
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.171	96.019	0.511