Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA63_RS04920 Genome accession   NZ_CP095107
Coordinates   1038411..1039454 (+) Length   347 a.a.
NCBI ID   WP_019166463.1    Uniprot ID   A0A2A4GVQ0
Organism   Staphylococcus delphini strain IVB6226     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1033411..1044454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA63_RS04895 (MUA63_04885) - 1033551..1034273 (+) 723 WP_262611974.1 type 1 glutamine amidotransferase -
  MUA63_RS04900 (MUA63_04890) - 1035357..1036355 (-) 999 WP_262611975.1 aromatic acid exporter family protein -
  MUA63_RS04905 (MUA63_04895) map 1036452..1037213 (+) 762 WP_019166460.1 type I methionyl aminopeptidase -
  MUA63_RS04910 (MUA63_04900) - 1037311..1037700 (+) 390 WP_262611976.1 hypothetical protein -
  MUA63_RS04915 (MUA63_04905) liaF 1037713..1038414 (+) 702 WP_096597675.1 cell wall-active antibiotics response protein LiaF -
  MUA63_RS04920 (MUA63_04910) vraS 1038411..1039454 (+) 1044 WP_019166463.1 sensor histidine kinase Regulator
  MUA63_RS04925 (MUA63_04915) vraR 1039444..1040073 (+) 630 WP_262611977.1 response regulator transcription factor Regulator
  MUA63_RS04930 (MUA63_04920) - 1040708..1041289 (-) 582 WP_262611978.1 carbonic anhydrase -
  MUA63_RS04935 (MUA63_04925) - 1041322..1042668 (-) 1347 WP_262611979.1 YihY/virulence factor BrkB family protein -
  MUA63_RS04940 (MUA63_04930) - 1042884..1043171 (-) 288 WP_014613485.1 YtxH domain-containing protein -
  MUA63_RS04945 (MUA63_04935) - 1043179..1043637 (-) 459 WP_262611980.1 low molecular weight protein-tyrosine-phosphatase -
  MUA63_RS04950 (MUA63_04940) - 1043771..1043974 (+) 204 WP_019169369.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39911.18 Da        Isoelectric Point: 5.0397

>NTDB_id=675484 MUA63_RS04920 WP_019166463.1 1038411..1039454(+) (vraS) [Staphylococcus delphini strain IVB6226]
MNHYVRAIGSMLILVYSMLTAFFFIDKVFTNIIFFQGMFYTQILGIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWVKQ
QIVRAFEGETVGINDQQLELYNETIELYQALVPLNQELHKMRIKTQNLTNETYNLNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKSLVTDLQRKVPIKVVQEI
DEFEVPKGIEDHLFRITQEAISNTLRHAEGTQVTVELLNRNDYLLLRIQDDGIGFNVDDKLEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEEQHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=675484 MUA63_RS04920 WP_019166463.1 1038411..1039454(+) (vraS) [Staphylococcus delphini strain IVB6226]
ATGAATCACTACGTCCGAGCGATAGGTTCGATGCTCATTCTCGTATATAGTATGCTCACCGCGTTTTTCTTTATCGATAA
AGTGTTTACCAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTAGGGATTCCTGTTTTTATCTTTTTAAATT
TAGTCGTCATTTTTTTATGTATTATCGTGGGCAGTGTGTTAGCTTATAAAATCAATCAACAAAATGATTGGGTGAAGCAA
CAAATCGTTCGTGCTTTCGAAGGCGAAACAGTGGGAATCAATGATCAACAACTTGAGCTGTATAATGAAACGATTGAATT
GTACCAAGCGCTCGTCCCATTGAATCAAGAACTGCATAAAATGCGGATTAAAACACAAAATTTAACGAATGAAACGTATA
ATTTAAATGATTTGAAGGTGAAAAAGATTATAGAAGATGAACGGCAGCGTTTAGCACGAGAATTGCATGATAGTGTGTCG
CAACAACTTTTCGCGGCAAGTATGATGTTGTCTGCAATCAAGGAAACAGATTTAGCTCCACCGTTAGACCAACAAATTCC
AACGTTAGAAAAAATGGTGCAAGACTCACAACTTGAAATGCGTGCACTGTTACTTCATTTAAGACCTATAGGATTGAAGG
ATAAATCGTTAGGTGAGGGGATAAAATCGCTCGTGACGGATTTACAACGCAAAGTGCCCATTAAAGTCGTGCAAGAAATT
GATGAGTTTGAAGTCCCTAAAGGTATTGAGGATCACCTTTTTAGGATTACCCAAGAAGCGATTTCCAATACGTTACGACA
TGCTGAGGGAACGCAAGTAACAGTAGAATTACTTAACCGCAATGATTATTTATTGTTGCGTATACAAGATGACGGCATTG
GATTTAATGTCGATGATAAATTAGAACAAAGTTATGGATTAAAAAATATGCGTGAACGTGCAATAGAGATTGGTGCCACG
TTTCATATCGTCTCATTACCTGATGCAGGGACGAGAATAGAAGTGAAAGCACCACTTGAAAAGGAGGAACAGCATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A4GVQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

83.573

100

0.836