Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA87_RS04845 Genome accession   NZ_CP095100
Coordinates   1081220..1082263 (+) Length   347 a.a.
NCBI ID   WP_002481663.1    Uniprot ID   -
Organism   Staphylococcus simulans strain IVB6189     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1076220..1087263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA87_RS04820 (MUA87_04820) - 1077223..1077942 (+) 720 WP_023015863.1 type 1 glutamine amidotransferase -
  MUA87_RS04825 (MUA87_04825) - 1078025..1079011 (-) 987 WP_002481667.1 aromatic acid exporter family protein -
  MUA87_RS04830 (MUA87_04830) map 1079231..1079995 (+) 765 WP_002481666.1 type I methionyl aminopeptidase -
  MUA87_RS04835 (MUA87_04835) - 1080111..1080506 (+) 396 WP_002481665.1 hypothetical protein -
  MUA87_RS04840 (MUA87_04840) liaF 1080522..1081223 (+) 702 WP_002481664.1 cell wall-active antibiotics response protein LiaF -
  MUA87_RS04845 (MUA87_04845) vraS 1081220..1082263 (+) 1044 WP_002481663.1 sensor histidine kinase Regulator
  MUA87_RS04850 (MUA87_04850) vraR 1082253..1082882 (+) 630 WP_002481662.1 response regulator transcription factor Regulator
  MUA87_RS04855 (MUA87_04855) - 1082953..1083531 (-) 579 WP_262551351.1 carbonic anhydrase -
  MUA87_RS04860 (MUA87_04860) - 1083739..1084815 (-) 1077 WP_002481660.1 YihY/virulence factor BrkB family protein -
  MUA87_RS04865 (MUA87_04865) - 1084946..1085236 (-) 291 WP_262551352.1 YtxH domain-containing protein -
  MUA87_RS04870 (MUA87_04870) - 1085244..1085708 (-) 465 WP_023015860.1 low molecular weight protein-tyrosine-phosphatase -
  MUA87_RS04875 (MUA87_04875) - 1085932..1086138 (+) 207 WP_002481657.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39897.15 Da        Isoelectric Point: 4.8944

>NTDB_id=675397 MUA87_RS04845 WP_002481663.1 1081220..1082263(+) (vraS) [Staphylococcus simulans strain IVB6189]
MNHYIRAIGSMLILNYSILAIFFFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILMSIIVGSVLAYKVNEQNDWIKT
QIEHSIEGEVVGINDQNIELYQETLDIYHTLVPLNQELHRLRIKTQDLTNETYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESPLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLFNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEENDGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=675397 MUA87_RS04845 WP_002481663.1 1081220..1082263(+) (vraS) [Staphylococcus simulans strain IVB6189]
ATGAACCACTATATCAGAGCCATCGGTTCGATGCTGATATTGAACTATAGTATATTAGCGATTTTCTTTTTTATAGACAA
AGTGTTCGTCAACATCATCTACTTTCAAGGAATGTTTTACACGCAGATTTTCGGCATTCCTGTTTTCTTATTTTTAAATA
TTATAGTGATTTTGATGAGTATTATTGTTGGTTCTGTGTTAGCGTATAAAGTGAACGAACAAAATGATTGGATTAAAACA
CAAATTGAACATTCCATTGAAGGGGAAGTTGTCGGTATTAATGATCAAAATATCGAACTCTACCAAGAAACTTTGGATAT
CTATCATACACTTGTGCCATTAAACCAAGAGTTACATCGACTACGTATTAAAACACAAGATTTGACCAACGAAACATATA
ATTTAAATGACGTTAAAGTGAAGAAAATTATAGAAGATGAACGCCAGCGTTTAGCTAGGGAATTGCATGATTCAGTTAGT
CAGCAATTATTTGCGGCAAGTATGATGTTATCAGCGATTAAGGAATCACCACTTGAACCGCCGCTTGATCAGCAAATTCC
GACACTAGAAAAGATGGTACAAGATTCGCAACTAGAAATGCGTGCATTGTTATTACATTTAAGACCGCTTGGCTTAAAAG
ATCGCTCACTTGGGGAAGGAATTAAAGATCTTGTTGTGGACTTACAAAAGAAAGTGCCTATGAAAGTAGTTTATGATATT
GAAGACTTTGAGGTACCAAAAGGCATAGAAGATCATTTATTCCGTATCACCCAAGAAGGGATTTCCAATACACTGCGACA
TGCAGAAGGCACAAAATTAACGATAGATTTATTTAATAAAGATGATTATCTGTTATTGCGTATTCAAGATGATGGTAAAG
GCTTTGATGTAGATGAAAAAATGGAGAAAAGCTATGGATTGAAGAATATGCGAGAGCGAGCATTAGAAATCGGGGCAACA
CTGCATATTGTTTCTTTGCCTGGGGCAGGGACAAGAATTGAAGTGAAGGCTCCATTGAATAAGGAGGAAAATGATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

86.167

100

0.862