Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   MUU70_RS12595 Genome accession   NZ_CP095093
Coordinates   2590879..2591631 (-) Length   250 a.a.
NCBI ID   WP_367069102.1    Uniprot ID   -
Organism   Bacillus velezensis strain D103     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2585879..2596631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUU70_RS12570 (MUU70_12575) mreC 2586315..2587178 (-) 864 WP_003152649.1 rod shape-determining protein MreC -
  MUU70_RS12575 (MUU70_12580) mreB 2587209..2588222 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  MUU70_RS12580 (MUU70_12585) radC 2588314..2589009 (-) 696 WP_007408165.1 DNA repair protein RadC -
  MUU70_RS12585 (MUU70_12590) - 2589041..2589610 (-) 570 WP_070082167.1 nucleoside triphosphate pyrophosphatase -
  MUU70_RS12590 (MUU70_12595) - 2589751..2590752 (-) 1002 WP_146284285.1 SPOR domain-containing protein -
  MUU70_RS12595 (MUU70_12600) comC 2590879..2591631 (-) 753 WP_367069102.1 A24 family peptidase Machinery gene
  MUU70_RS12600 (MUU70_12605) - 2591771..2593063 (-) 1293 WP_206584081.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  MUU70_RS12605 (MUU70_12610) - 2593122..2595764 (-) 2643 WP_060674740.1 valine--tRNA ligase -
  MUU70_RS12610 (MUU70_12615) - 2596217..2596408 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27037.67 Da        Isoelectric Point: 9.0703

>NTDB_id=675330 MUU70_RS12595 WP_367069102.1 2590879..2591631(-) (comC) [Bacillus velezensis strain D103]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCGLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLDSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGSLGKKQPFPFAPAISAGSALSYLYGDELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=675330 MUU70_RS12595 WP_367069102.1 2590879..2591631(-) (comC) [Bacillus velezensis strain D103]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTAATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTTCGAAT
CTCGGTTATTTCGCCGCGTTCAGCCTGCTCGTTCTGCGGCTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTCTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCGAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCG
TGTTTATTCACGGCTGCAGGCATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTGCTCAT
GATTGTTACTATGACGGATCTGCAATATATGCTGATTCCTGACAAAGTTCTGCTGTTTTTTCTTCCGCTTTTTATCGCCG
GCCGTATGTTTTCTCCGCTGGATTCATGGTATGCGGGTTTTGCCGGAGCTGTTTGCGGATTTTTTCTGCTAGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGTCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCCGTATACGGTATGTGCGCTGCAGCCCGGGGCAGTCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGATGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGCGGAGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

58.468

99.2

0.58