Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MUU70_RS11215 Genome accession   NZ_CP095093
Coordinates   2349204..2350004 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain D103     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2344204..2355004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUU70_RS11185 (MUU70_11200) - 2344749..2345381 (+) 633 WP_071391633.1 helix-turn-helix domain-containing protein -
  MUU70_RS11190 (MUU70_11205) - 2345672..2345809 (+) 138 WP_014470646.1 hypothetical protein -
  MUU70_RS11195 (MUU70_11210) - 2345903..2347021 (+) 1119 WP_003153184.1 NADH-dependent flavin oxidoreductase -
  MUU70_RS11200 (MUU70_11215) - 2347148..2347360 (+) 213 WP_003153183.1 spore germination protein -
  MUU70_RS11205 (MUU70_11220) - 2347487..2347699 (+) 213 WP_003153181.1 spore germination protein -
  MUU70_RS11210 (MUU70_11225) alr 2347875..2349056 (+) 1182 WP_367069084.1 alanine racemase -
  MUU70_RS11215 (MUU70_11230) spo0A 2349204..2350004 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  MUU70_RS11220 (MUU70_11235) spoIVB 2350285..2351565 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  MUU70_RS11225 (MUU70_11240) recN 2351729..2353459 (-) 1731 WP_102421902.1 DNA repair protein RecN Machinery gene
  MUU70_RS11230 (MUU70_11245) argR 2353491..2353940 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  MUU70_RS11235 (MUU70_11250) - 2354035..2354880 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=675313 MUU70_RS11215 WP_003153177.1 2349204..2350004(-) (spo0A) [Bacillus velezensis strain D103]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=675313 MUU70_RS11215 WP_003153177.1 2349204..2350004(-) (spo0A) [Bacillus velezensis strain D103]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TGTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGTGAATCAGAGCTTGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCATCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTACCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97