Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MUU70_RS08465 Genome accession   NZ_CP095093
Coordinates   1736560..1736994 (+) Length   144 a.a.
NCBI ID   WP_146283509.1    Uniprot ID   -
Organism   Bacillus velezensis strain D103     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1731560..1741994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUU70_RS08460 (MUU70_08480) - 1735060..1736271 (-) 1212 WP_146283510.1 cytochrome P450 -
  MUU70_RS08465 (MUU70_08485) nucA/comI 1736560..1736994 (+) 435 WP_146283509.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MUU70_RS08470 (MUU70_08490) - 1737055..1737810 (+) 756 WP_367069960.1 YoaK family protein -
  MUU70_RS08475 (MUU70_08495) - 1737844..1738206 (-) 363 WP_367069962.1 hypothetical protein -
  MUU70_RS08480 (MUU70_08500) - 1738399..1739727 (-) 1329 WP_367069964.1 S8 family peptidase -
  MUU70_RS08485 (MUU70_08505) - 1739905..1740138 (+) 234 WP_278071864.1 hypothetical protein -
  MUU70_RS08490 (MUU70_08510) - 1740395..1741102 (+) 708 WP_003154076.1 poly-gamma-glutamate hydrolase family protein -
  MUU70_RS08495 (MUU70_08515) - 1741163..1741615 (+) 453 WP_070081858.1 OsmC family protein -
  MUU70_RS08500 (MUU70_08520) - 1741629..1741982 (-) 354 WP_003154073.1 multidrug efflux SMR transporter -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15556.48 Da        Isoelectric Point: 7.2419

>NTDB_id=675311 MUU70_RS08465 WP_146283509.1 1736560..1736994(+) (nucA/comI) [Bacillus velezensis strain D103]
MNAFMKWAASLLLVISLQFGLTGAGIHSDSAARAASRYDQVLYFPLSKYPETGNHIKDAISAGHSEICTIDRGGAENRRR
ESLKGIPTKPGFDRDEWPMAVCTEGGAGADIRYVTPSDNRGAGSWVGNQMSGYSDGTRVLFIVQ

Nucleotide


Download         Length: 435 bp        

>NTDB_id=675311 MUU70_RS08465 WP_146283509.1 1736560..1736994(+) (nucA/comI) [Bacillus velezensis strain D103]
ATGAATGCGTTTATGAAATGGGCGGCAAGTCTGCTTTTGGTGATCTCTCTTCAGTTCGGCCTTACGGGCGCCGGCATCCA
TTCGGACAGTGCTGCTCGTGCCGCATCCCGATACGATCAGGTGCTGTATTTCCCGCTGTCAAAATATCCGGAAACGGGAA
ATCATATAAAAGACGCCATTTCGGCAGGTCATTCTGAGATTTGTACAATTGATCGGGGCGGAGCGGAGAATAGAAGGAGA
GAATCATTGAAAGGAATTCCGACAAAGCCCGGGTTTGACCGTGATGAATGGCCCATGGCAGTCTGCACAGAAGGCGGGGC
GGGGGCTGATATCAGATATGTAACCCCGTCGGATAACCGCGGGGCCGGTTCATGGGTTGGAAATCAAATGAGCGGCTATT
CCGACGGCACGAGAGTATTATTTATCGTTCAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-138)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

56.452

86.111

0.486