Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MUU70_RS06950 Genome accession   NZ_CP095093
Coordinates   1326890..1327486 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain D103     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1321890..1332486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUU70_RS06920 (MUU70_06940) - 1322105..1322560 (+) 456 WP_094246983.1 flavodoxin -
  MUU70_RS06925 (MUU70_06945) dapD 1322642..1323352 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MUU70_RS06930 (MUU70_06950) - 1323423..1324547 (+) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  MUU70_RS06935 (MUU70_06955) - 1324608..1324853 (+) 246 WP_003154596.1 YkuS family protein -
  MUU70_RS06940 (MUU70_06960) - 1324887..1325693 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  MUU70_RS06945 (MUU70_06965) - 1325980..1326438 (+) 459 WP_094246981.1 redoxin domain-containing protein -
  MUU70_RS06950 (MUU70_06970) rok 1326890..1327486 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  MUU70_RS06955 (MUU70_06975) - 1327507..1328499 (-) 993 WP_102421863.1 sporulation protein -
  MUU70_RS06960 (MUU70_06980) - 1328645..1329247 (+) 603 WP_102421864.1 molybdenum cofactor guanylyltransferase -
  MUU70_RS06965 (MUU70_06985) - 1329299..1330318 (+) 1020 WP_102421865.1 molybdopterin-synthase adenylyltransferase MoeB -
  MUU70_RS06970 (MUU70_06990) glp 1330336..1331628 (+) 1293 WP_102421866.1 gephyrin-like molybdotransferase Glp -
  MUU70_RS06975 (MUU70_06995) mobB 1331589..1332110 (+) 522 WP_367069857.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=675305 MUU70_RS06950 WP_070081746.1 1326890..1327486(+) (rok) [Bacillus velezensis strain D103]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=675305 MUU70_RS06950 WP_070081746.1 1326890..1327486(+) (rok) [Bacillus velezensis strain D103]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTGGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATACATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859