Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JMUB0001_RS01275 Genome accession   NZ_AP014956
Coordinates   289997..290662 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis strain TW2795     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 284997..295662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMUB0001_RS01255 (JMUB0001_238) - 285085..285711 (-) 627 WP_030059212.1 FMN-dependent NADH-azoreductase -
  JMUB0001_RS01260 - 285983..286084 (+) 102 WP_016898541.1 SE2200 family small protein -
  JMUB0001_RS01265 (JMUB0001_239) - 286268..287809 (+) 1542 WP_023351027.1 NAD(P)H-binding protein -
  JMUB0001_RS01270 (JMUB0001_240) - 288003..289487 (-) 1485 WP_030059210.1 alkaline phosphatase -
  JMUB0001_RS12270 (JMUB0001_241) - 289814..289966 (+) 153 WP_002436229.1 hypothetical protein -
  JMUB0001_RS01275 (JMUB0001_242) braR 289997..290662 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  JMUB0001_RS01280 (JMUB0001_243) braS 290668..291564 (+) 897 WP_030059207.1 sensor histidine kinase Regulator
  JMUB0001_RS01285 (JMUB0001_244) - 291674..292423 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  JMUB0001_RS01290 (JMUB0001_245) - 292449..294440 (+) 1992 WP_230580066.1 ABC transporter permease -
  JMUB0001_RS01295 (JMUB0001_246) - 294667..295539 (+) 873 WP_037550647.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=67527 JMUB0001_RS01275 WP_002436233.1 289997..290662(+) (braR) [Staphylococcus capitis strain TW2795]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=67527 JMUB0001_RS01275 WP_002436233.1 289997..290662(+) (braR) [Staphylococcus capitis strain TW2795]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTGTTAGATATCAATT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCAAGA
ACCGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTTGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833

Multiple sequence alignment