Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUW37_RS04465 Genome accession   NZ_CP095090
Coordinates   953796..954842 (+) Length   348 a.a.
NCBI ID   WP_001830374.1    Uniprot ID   A0A0N1EGU4
Organism   Staphylococcus epidermidis strain SKN25lux     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 948796..959842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUW37_RS04440 (MUW37_04440) - 949937..950473 (+) 537 WP_001830372.1 hypothetical protein -
  MUW37_RS04445 (MUW37_04445) - 950624..951610 (-) 987 WP_002457091.1 aromatic acid exporter family protein -
  MUW37_RS04450 (MUW37_04450) map 951784..952539 (+) 756 WP_002457092.1 type I methionyl aminopeptidase -
  MUW37_RS04455 (MUW37_04455) - 952697..953083 (+) 387 WP_001830382.1 hypothetical protein -
  MUW37_RS04460 (MUW37_04460) liaF 953098..953799 (+) 702 WP_002457093.1 cell wall-active antibiotics response protein LiaF -
  MUW37_RS04465 (MUW37_04465) vraS 953796..954842 (+) 1047 WP_001830374.1 sensor histidine kinase Regulator
  MUW37_RS04470 (MUW37_04470) vraR 954832..955461 (+) 630 WP_001830439.1 two-component system response regulator VraR Regulator
  MUW37_RS04475 (MUW37_04475) - 955518..956696 (-) 1179 WP_001830411.1 YihY/virulence factor BrkB family protein -
  MUW37_RS04480 (MUW37_04480) - 957103..957387 (-) 285 WP_001830401.1 YtxH domain-containing protein -
  MUW37_RS04485 (MUW37_04485) - 957395..957859 (-) 465 WP_001830437.1 low molecular weight protein-tyrosine-phosphatase -
  MUW37_RS04490 (MUW37_04490) - 958000..958215 (+) 216 WP_001830421.1 DUF1128 domain-containing protein -
  MUW37_RS04495 (MUW37_04495) - 958217..959458 (+) 1242 WP_002457094.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40066.49 Da        Isoelectric Point: 5.8512

>NTDB_id=675202 MUW37_RS04465 WP_001830374.1 953796..954842(+) (vraS) [Staphylococcus epidermidis strain SKN25lux]
MNHYIRAIGSMLILVYSMLIAFLFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNLLIVLLCIIVGSVLAYKINQQNDWIIS
QIERSIEGQTVGINDQNIELYTETIDIYHTLVPLNQELHRLRMKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESKLEPPLNQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFEVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQEDYLLLRIQDNGKGFNVDEKFEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEENSSGD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=675202 MUW37_RS04465 WP_001830374.1 953796..954842(+) (vraS) [Staphylococcus epidermidis strain SKN25lux]
ATGAATCACTACATAAGAGCTATAGGCTCAATGCTTATATTAGTATATAGTATGCTTATTGCTTTTTTATTTATTGATAA
AGTGTTTGTAAATATTATCTTTTTTCAGGGGATGTTTTATACACAAATATTTGGAATACCTGTTTTTCTATTTTTAAATT
TATTAATTGTTCTTTTATGTATTATAGTTGGATCTGTTTTAGCTTATAAAATTAATCAACAAAATGATTGGATTATTTCA
CAAATAGAAAGATCAATAGAAGGACAAACAGTAGGTATCAATGATCAAAATATCGAATTATATACAGAAACGATAGATAT
TTATCATACACTAGTTCCATTAAATCAAGAATTACATCGACTTAGAATGAAGACTCAAAATTTAACTAATGAAAACTACA
ATATTAATGATGTAAAAGTCAAAAAGATTATCGAAGATGAGCGACAACGACTTGCCAGGGAATTACATGATTCTGTTAGT
CAACAATTATTTGCTGCGAGCATGATGCTATCGGCGATAAAAGAGTCGAAATTAGAACCACCTTTAAATCAACAGATACC
AATTCTTGAAAAAATGGTTCAAGACTCACAACTTGAAATGAGAGCTTTGTTATTACATTTAAGACCGATAGGTTTAAAAG
ATAAGTCTTTAGGTGAAGGAATTAAAGATTTAGTCATCGATTTACAAAAGAAAGTACCAATGAAAGTTGTGCATGAAATT
CAAGATTTTGAAGTGCCAAAAGGCATTGAAGATCACTTGTTCAGAATTACACAAGAAGCTATTTCAAATACATTGAGACA
TTCAAATGGTACAAAAGTAACTGTGGAATTATTTAATCAAGAGGATTATCTTTTACTAAGAATTCAAGATAATGGAAAAG
GATTTAATGTAGATGAAAAATTTGAACAAAGTTATGGTTTGAAAAATATGCGAGAACGAGCGTTAGAAATTGGTGCGACG
TTTCATATTGTATCTTTACCTGATTCAGGTACACGAATTGAAGTTAAGGCACCATTGAATAAGGAGGAGAATTCAAGTGG
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0N1EGU4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

93.023

98.851

0.92