Detailed information NTG0675151

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHA89_RS23775
• Genome accession: NZ_CP109379
• Coordinates: 5190357..5191385 (+)
• Length: 342 a.a.
• NCBI ID: WP_266609629.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01546
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5185357..5196385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA89_RS23755 (OHA89_23690)	-	5185859..5187076 (+)	1218	Protein_4679	RNA-guided endonuclease InsQ/TnpB family protein	-
OHA89_RS23760 (OHA89_23695)	-	5187090..5187914 (-)	825	WP_215147426.1	carbohydrate ABC transporter permease	-
OHA89_RS23765 (OHA89_23700)	-	5187911..5188897 (-)	987	WP_406367043.1	carbohydrate ABC transporter permease	-
OHA89_RS23770 (OHA89_23705)	-	5188905..5190254 (-)	1350	WP_266609628.1	ABC transporter substrate-binding protein	-
OHA89_RS23775 (OHA89_23710)	cytR	5190357..5191385 (+)	1029	WP_266609629.1	LacI family DNA-binding transcriptional regulator	Regulator
OHA89_RS23785 (OHA89_23720)	orn	5191616..5192218 (-)	603	WP_406367045.1	oligoribonuclease	-
OHA89_RS23790 (OHA89_23725)	-	5192325..5193497 (-)	1173	WP_215147416.1	helix-turn-helix domain-containing protein	-
OHA89_RS23795 (OHA89_23730)	-	5193874..5194320 (-)	447	WP_323186017.1	hypothetical protein	-
OHA89_RS23800 (OHA89_23735)	-	5194644..5195177 (+)	534	WP_215147414.1	universal stress protein	-
OHA89_RS23805 (OHA89_23740)	-	5195276..5195845 (+)	570	WP_215147412.1	acetate uptake transporter	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 36133.07 Da
• Isoelectric Point: 8.1072

>NTDB_id=675151 OHA89_RS23775 WP_266609629.1 5190357..5191385(+) (cytR) [Streptomyces sp. NBC_01546]
MKGQGRKRGRPTLEEVAVRAGVGRGTVSRVINGSSKVSDHTRTAVEAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSDVVRGVGSALAETDVQLVLTLAGSDRERRRLSQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPSVDSDNLGGAAEAVRHLVGRGRRAIATITGPLDVYGAQCRLDGYRQALAAAGHLADEGLISVGDFTEEGGRRA
MRELLERRPALDAVFAASDVMAAGARRELRAAGRRIPQDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARVLLAGI
AGEPGGDAAVVLPNRLVVRESS

Nucleotide

• Length: 1029 bp

>NTDB_id=675151 OHA89_RS23775 WP_266609629.1 5190357..5191385(+) (cytR) [Streptomyces sp. NBC_01546]
ATGAAGGGGCAAGGGCGCAAAAGGGGACGGCCGACCCTGGAGGAGGTCGCGGTGCGCGCCGGAGTCGGGCGCGGCACGGT
CTCCCGGGTGATCAACGGTTCCTCCAAGGTCAGCGACCACACCAGGACCGCCGTGGAGGCGGCCGTCGCCGAGCTGGGCT
ACGTGCCCAACCGCGCGGCCCGCGCCCTCGCGGCCAACCGTACCGACGCCATCGCTCTCGTGATTCCCGAGCCGGAGGCC
CGCTTCTTCGCCGAGCCGTACTTCTCCGACGTGGTCCGCGGGGTCGGCTCCGCCCTCGCCGAGACCGACGTCCAGCTCGT
CCTCACCCTGGCCGGCAGCGACCGCGAGCGCCGCCGCCTCTCCCAGTACCTGTCGGGGCACCGCGTCGACGGGGTGCTCC
TCGTCTCCGTCCACGCCGGGGATCCGCTGCCGGAGCTGCTGGCCGAGCTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCCGCCGCCGAGACGCTGCCCTCGGTGGATTCGGACAACCTGGGGGGCGCGGCCGAGGCCGTACGCCACCTCGTCGGCCG
GGGCCGCCGCGCGATCGCCACGATCACCGGACCGCTGGACGTGTACGGGGCCCAGTGCCGCCTCGACGGCTACCGGCAGG
CCCTGGCCGCCGCCGGGCACCTGGCCGACGAGGGGCTGATCTCGGTCGGCGACTTCACCGAGGAGGGCGGCCGCCGGGCC
ATGCGCGAGCTGCTGGAGCGCCGCCCGGCGCTCGACGCGGTCTTCGCGGCCTCGGACGTCATGGCGGCGGGCGCCCGGCG
GGAGCTGCGCGCGGCCGGCCGCCGGATTCCGCAGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGGCAGCCGATCGAGGAGATGGGCCGGACCATGGCGCGGGTGCTGCTGGCCGGGATC
GCCGGGGAACCGGGGGGAGACGCGGCCGTCGTGCTCCCGAACCGGCTGGTGGTCCGGGAGTCCTCGTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-342)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	38.166	98.83	0.377
cytR	Vibrio parahaemolyticus RIMD 2210633	37.574	98.83	0.371