Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   MP619_RS03090 Genome accession   NZ_CP095081
Coordinates   579787..580824 (+) Length   345 a.a.
NCBI ID   WP_129555395.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 574787..585824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS03065 (MP619_03055) - 575830..576183 (-) 354 WP_129555391.1 DUF3397 domain-containing protein -
  MP619_RS03070 (MP619_03060) - 576383..577405 (+) 1023 WP_129555386.1 IS30 family transposase -
  MP619_RS03075 (MP619_03065) asnA 577595..578587 (+) 993 WP_003061055.1 aspartate--ammonia ligase -
  MP619_RS03080 (MP619_03070) rsmD 578780..579319 (+) 540 WP_129555393.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  MP619_RS03085 (MP619_03075) coaD 579309..579800 (+) 492 WP_129555394.1 pantetheine-phosphate adenylyltransferase -
  MP619_RS03090 (MP619_03080) sepM 579787..580824 (+) 1038 WP_129555395.1 SepM family pheromone-processing serine protease Regulator
  MP619_RS03095 (MP619_03085) - 581105..582088 (+) 984 WP_003051900.1 LacI family DNA-binding transcriptional regulator -
  MP619_RS03100 (MP619_03090) rbsK 582081..582992 (+) 912 WP_129555396.1 ribokinase -
  MP619_RS03105 (MP619_03095) rbsD 582967..583365 (+) 399 WP_003051896.1 D-ribose pyranase -
  MP619_RS03110 (MP619_03100) - 583381..584859 (+) 1479 WP_129555397.1 sugar ABC transporter ATP-binding protein -
  MP619_RS03115 (MP619_03105) rbsC 584861..585802 (+) 942 WP_037584987.1 ribose ABC transporter permease -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37565.13 Da        Isoelectric Point: 9.5392

>NTDB_id=675089 MP619_RS03090 WP_129555395.1 579787..580824(+) (sepM) [Streptococcus dysgalactiae strain WJ001]
MKTIKKIKWWLISLIALVALLIILFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDVSKDSTFKGALNLADTVTGVNNK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKNGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALTYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=675089 MP619_RS03090 WP_129555395.1 579787..580824(+) (sepM) [Streptococcus dysgalactiae strain WJ001]
ATGAAAACGATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCATCCTCTTTTTCCC
TCTTCCTTACTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGACACCACAGGCGGTTACAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTCT
ATGTGTTAGATGTTAGCAAGGATTCAACCTTTAAAGGTGCTTTAAACTTAGCAGATACGGTAACGGGAGTGAATAACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGCGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGTGGTCCTAGCGCAGGCTTAATGTTT
ACACTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGAACAGGAACCATTGGTAA
AAATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAACCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.594

100

0.716