Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAFDA_RS13585 Genome accession   NZ_AP014942
Coordinates   2674058..2674723 (-) Length   221 a.a.
NCBI ID   WP_042727676.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDA209P     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2669058..2679723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAFDA_RS13560 - 2669528..2669641 (-) 114 WP_011447078.1 hypothetical protein -
  SAFDA_RS13570 (SAFDA_2476) - 2670300..2672300 (-) 2001 WP_000776734.1 ABC transporter permease -
  SAFDA_RS13575 (SAFDA_2477) - 2672297..2673052 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  SAFDA_RS13580 (SAFDA_2478) braS 2673160..2674047 (-) 888 WP_042727677.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAFDA_RS13585 (SAFDA_2479) braR 2674058..2674723 (-) 666 WP_042727676.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SAFDA_RS13590 (SAFDA_2480) - 2674749..2674949 (-) 201 WP_000604727.1 hypothetical protein -
  SAFDA_RS13600 (SAFDA_2481) - 2675147..2676571 (+) 1425 WP_000953758.1 alkaline phosphatase -
  SAFDA_RS15290 - 2676631..2676732 (-) 102 WP_000731972.1 SE2200 family small protein -
  SAFDA_RS13605 (SAFDA_2482) - 2676854..2677309 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAFDA_RS13610 (SAFDA_2483) - 2677554..2678315 (-) 762 WP_000323442.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25414.55 Da        Isoelectric Point: 5.0976

>NTDB_id=67506 SAFDA_RS13585 WP_042727676.1 2674058..2674723(-) (braR) [Staphylococcus aureus strain FDA209P]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQKQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=67506 SAFDA_RS13585 WP_042727676.1 2674058..2674723(-) (braR) [Staphylococcus aureus strain FDA209P]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAAAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment