Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MUO15_RS12600 Genome accession   NZ_CP095075
Coordinates   2447377..2448330 (-) Length   317 a.a.
NCBI ID   WP_245029641.1    Uniprot ID   -
Organism   Halobacillus amylolyticus strain SSHM10-5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2442377..2453330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO15_RS12575 (MUO15_12575) - 2443322..2443465 (-) 144 WP_245029635.1 GNAT family N-acetyltransferase -
  MUO15_RS12580 (MUO15_12580) - 2443470..2444699 (-) 1230 WP_245029637.1 nuclease-related domain-containing protein -
  MUO15_RS12585 (MUO15_12585) - 2444735..2445667 (-) 933 WP_245029638.1 siderophore ABC transporter substrate-binding protein -
  MUO15_RS12590 (MUO15_12590) - 2445691..2446446 (-) 756 WP_245029639.1 ABC transporter ATP-binding protein -
  MUO15_RS12595 (MUO15_12595) - 2446443..2447387 (-) 945 WP_245029640.1 iron chelate uptake ABC transporter family permease subunit -
  MUO15_RS12600 (MUO15_12600) ceuB 2447377..2448330 (-) 954 WP_245029641.1 ABC transporter permease Machinery gene
  MUO15_RS12605 (MUO15_12605) - 2448523..2449101 (+) 579 WP_245036014.1 TetR/AcrR family transcriptional regulator -
  MUO15_RS12610 (MUO15_12610) bioB 2449331..2450323 (-) 993 WP_245029642.1 biotin synthase BioB -
  MUO15_RS12615 (MUO15_12615) - 2450336..2450878 (-) 543 WP_245036016.1 biotin transporter BioY -
  MUO15_RS12620 (MUO15_12620) - 2451067..2451891 (-) 825 WP_245029643.1 aldo/keto reductase -
  MUO15_RS12625 (MUO15_12625) - 2452127..2453074 (-) 948 WP_245029644.1 nuclease-related domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34851.81 Da        Isoelectric Point: 9.3471

>NTDB_id=675048 MUO15_RS12600 WP_245029641.1 2447377..2448330(-) (ceuB) [Halobacillus amylolyticus strain SSHM10-5]
MKFRYTLSILIILSIVSLFVGVSDVSILDAFQLTPEQIDILLISRFPRLVSILIAGASISICGLIMQQLTRNKFVSPTTA
GTFDSARLGVLVSLLVFTSASPLVKMMVAFGFALLGTFIFMQILERIPFKDTIFIPLVGLMFGNVISSISTFFALKYNLV
QNMSSWLHGDFSMIMEGRYEMMFISIPFLVIAYLYANQFTIAGVGEDFAKNVGLNYKQVVNIGLAIVAMVTASVVLTVGM
IPFLGLIVPNIVTYYYGDHLKKSIIQTAIIGAAFVLACDVLGRVIIYPYEISISVTVGVIGSGIFIYLLMRRRSYAA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=675048 MUO15_RS12600 WP_245029641.1 2447377..2448330(-) (ceuB) [Halobacillus amylolyticus strain SSHM10-5]
ATGAAATTTAGGTACACACTTTCCATTCTTATCATTTTAAGTATTGTTTCCCTGTTCGTTGGCGTGTCGGATGTGTCGAT
CTTGGATGCTTTTCAACTAACCCCGGAACAGATTGATATTTTACTGATCAGCCGTTTTCCAAGATTAGTGAGCATACTTA
TTGCTGGAGCCAGCATAAGTATTTGCGGACTGATTATGCAGCAGCTGACAAGGAACAAATTCGTCTCACCCACAACGGCG
GGTACTTTTGATTCAGCACGACTTGGTGTATTGGTATCGTTACTTGTTTTTACATCGGCAAGTCCTTTGGTGAAAATGAT
GGTGGCGTTTGGCTTTGCTCTTTTAGGCACGTTTATTTTCATGCAAATCTTAGAGCGGATTCCCTTCAAGGACACAATTT
TCATCCCTCTCGTTGGTTTAATGTTTGGGAATGTGATCAGTTCAATTTCTACATTTTTCGCGTTGAAATACAACCTTGTT
CAAAACATGTCGTCCTGGTTGCATGGTGATTTCTCGATGATTATGGAAGGTCGTTATGAAATGATGTTCATTTCGATCCC
TTTTCTGGTGATTGCCTATCTATACGCAAATCAATTTACCATAGCGGGAGTAGGGGAGGATTTTGCCAAAAATGTGGGAT
TGAACTATAAGCAGGTCGTGAACATTGGATTAGCTATTGTTGCGATGGTGACGGCATCTGTTGTCTTGACAGTAGGCATG
ATCCCGTTCTTAGGCTTAATCGTTCCAAATATCGTAACGTACTACTACGGGGATCATTTGAAGAAGAGTATCATTCAAAC
AGCGATTATCGGTGCTGCATTCGTCCTGGCCTGTGATGTCTTAGGTCGAGTGATCATTTATCCTTATGAGATTTCAATCA
GTGTAACCGTTGGCGTCATCGGTAGCGGAATCTTTATTTACCTACTGATGAGGAGGCGGTCGTATGCAGCTTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.051

99.685

0.489