Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MUO15_RS02170 Genome accession   NZ_CP095075
Coordinates   400840..402567 (+) Length   575 a.a.
NCBI ID   WP_245033135.1    Uniprot ID   -
Organism   Halobacillus amylolyticus strain SSHM10-5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 395840..407567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO15_RS02150 (MUO15_02150) - 396981..397583 (+) 603 WP_245033131.1 hypothetical protein -
  MUO15_RS02155 (MUO15_02155) dxs 397595..399484 (+) 1890 WP_245033133.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MUO15_RS02160 (MUO15_02160) - 399486..400310 (+) 825 WP_245035806.1 TlyA family RNA methyltransferase -
  MUO15_RS02165 (MUO15_02165) ahrC 400372..400821 (+) 450 WP_244753305.1 transcriptional regulator AhrC/ArgR -
  MUO15_RS02170 (MUO15_02170) recN 400840..402567 (+) 1728 WP_245033135.1 DNA repair protein RecN Machinery gene
  MUO15_RS02175 (MUO15_02175) spoIVB 402811..404073 (+) 1263 WP_256464160.1 SpoIVB peptidase -
  MUO15_RS02180 (MUO15_02180) spo0A 404308..405081 (+) 774 WP_245033137.1 sporulation transcription factor Spo0A -
  MUO15_RS02185 (MUO15_02185) - 405198..406547 (+) 1350 WP_245033139.1 aspartate kinase -
  MUO15_RS02190 (MUO15_02190) - 406567..407313 (-) 747 WP_245033141.1 PolC-type DNA polymerase III -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 65263.75 Da        Isoelectric Point: 4.8149

>NTDB_id=675034 MUO15_RS02170 WP_245033135.1 400840..402567(+) (recN) [Halobacillus amylolyticus strain SSHM10-5]
MLTELSIKDFAIIDQVSITFKEGLTVLTGETGAGKSIIIDAIQLLSGGRGSVEYVRHGAAKAEIEGLFTVQTGHAVYQKG
KQFGVEIGEDGMVVLQRTITHQGKSICRVNGKLVTLGILKEFGYSLIDIHSQHETQSLMDPDHHIELLDMFAKDQLRVSL
DEYKQLYSKYQTVKKRYKELSENEQEMAQRLDLLEFQLRELQEAELRPYEDEELEEERKKLMNYEKVYQGIHDAYYALYG
EQKGLDWLSLAMNSLESTSDYDNQLAKLSEDMSNSYYVIEELTFQLSTQMSELEFDPERLNEIESRLNELNRLKKKYGQT
VEDMMEYASEIEEEMDEIKNKDSHLHKLEQQITELGEDAVLEAKNIHDIRKQTSERLSGLIHSELTDLYLEKASFQADIS
IKEGSQDNPEFEGKHVRLLPNGFNTITFLITTNPGEPLKEIHKVASGGEMSRIMLALKRIFSRHQGVTSVIFDEVDTGVS
GRVAQAIAEKIHGISVGSQVLCISHLPQVAAMADTHVRIEKNISNQRTSTVVTELSEEDKADELSRMITGAELTNTTLEH
ARELLKLASKHKQKV

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=675034 MUO15_RS02170 WP_245033135.1 400840..402567(+) (recN) [Halobacillus amylolyticus strain SSHM10-5]
ATGTTAACAGAATTATCCATAAAGGATTTTGCAATCATTGATCAGGTTTCCATTACTTTTAAAGAAGGACTCACAGTTCT
GACCGGTGAGACAGGGGCAGGAAAGTCCATCATTATAGATGCCATTCAACTTCTATCTGGCGGACGCGGTTCTGTAGAGT
ATGTCCGCCACGGTGCAGCTAAGGCAGAGATTGAGGGGTTATTTACCGTCCAAACAGGGCATGCTGTTTATCAAAAGGGA
AAGCAGTTTGGTGTGGAGATTGGTGAAGATGGAATGGTTGTGCTGCAACGAACCATTACACATCAAGGGAAAAGCATTTG
CCGAGTCAATGGAAAACTTGTGACCTTAGGCATCCTAAAAGAGTTTGGCTACAGCTTAATTGATATCCATAGCCAACATG
AAACGCAATCTTTAATGGATCCGGACCATCATATTGAATTGCTAGATATGTTTGCTAAAGACCAGCTTCGCGTTTCCTTA
GATGAATACAAACAACTGTATTCAAAGTATCAAACCGTGAAAAAACGCTATAAAGAGCTTAGTGAGAATGAACAGGAAAT
GGCTCAACGTTTAGACTTACTTGAGTTTCAGCTGAGAGAACTTCAGGAAGCTGAATTACGTCCATATGAGGATGAGGAGC
TTGAGGAAGAACGTAAGAAGCTTATGAACTATGAGAAAGTGTATCAAGGAATCCACGATGCCTATTATGCTTTATATGGA
GAGCAAAAAGGGTTAGATTGGTTAAGCCTTGCAATGAATTCATTAGAAAGTACGTCAGATTATGATAACCAGCTGGCTAA
GCTCTCAGAAGATATGTCAAACAGCTATTATGTTATTGAAGAATTGACTTTTCAATTAAGCACTCAAATGTCTGAACTCG
AATTTGATCCTGAGCGTCTAAATGAGATAGAATCACGCTTAAATGAACTTAACCGATTAAAGAAGAAATATGGTCAAACG
GTTGAGGACATGATGGAATATGCCTCAGAAATAGAAGAGGAAATGGATGAAATTAAAAATAAGGATTCTCATCTTCACAA
ATTAGAACAGCAAATAACGGAACTTGGTGAGGATGCTGTCTTAGAAGCTAAGAATATCCATGATATACGAAAACAGACTT
CAGAACGGTTATCTGGACTTATTCATTCGGAGTTAACAGATCTTTATTTAGAAAAAGCCTCATTTCAAGCTGATATCTCA
ATAAAGGAAGGAAGCCAAGATAATCCCGAATTTGAAGGAAAGCATGTTCGTCTACTTCCTAATGGCTTTAACACCATTAC
CTTCCTAATTACAACGAATCCAGGCGAGCCTCTAAAGGAAATACATAAAGTAGCTTCTGGAGGGGAAATGTCGCGGATTA
TGCTAGCGTTAAAACGTATTTTTTCACGTCATCAAGGTGTAACAAGTGTTATATTTGATGAGGTGGATACAGGTGTAAGT
GGAAGAGTAGCACAGGCTATTGCAGAAAAGATCCATGGTATTTCAGTCGGTTCACAGGTGCTTTGTATTTCTCATTTACC
GCAGGTTGCAGCTATGGCTGATACGCATGTAAGAATTGAGAAAAATATCAGCAATCAACGCACCTCCACAGTTGTTACTG
AACTATCTGAAGAGGATAAAGCAGATGAGCTATCCCGGATGATAACGGGTGCAGAATTGACTAATACGACACTTGAACAT
GCAAGAGAGTTGCTGAAGCTGGCTTCAAAACATAAACAAAAGGTTTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

54.878

99.826

0.548