Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   MUO14_RS20800 Genome accession   NZ_CP095074
Coordinates   4187146..4188096 (+) Length   316 a.a.
NCBI ID   WP_244752429.1    Uniprot ID   -
Organism   Halobacillus shinanisalinarum strain SSTM10-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 4182146..4193096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO14_RS20760 (MUO14_20760) - 4182191..4182958 (+) 768 WP_244752422.1 alpha/beta fold hydrolase -
  MUO14_RS20765 (MUO14_20765) - 4183036..4183347 (+) 312 WP_079529396.1 metal-sulfur cluster assembly factor -
  MUO14_RS20770 (MUO14_20770) mobB 4183472..4183996 (+) 525 WP_244752423.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MUO14_RS20775 (MUO14_20775) - 4183989..4184456 (+) 468 WP_244752424.1 molybdenum cofactor biosynthesis protein MoaE -
  MUO14_RS20780 (MUO14_20780) moaD 4184453..4184686 (+) 234 WP_244752425.1 molybdopterin converting factor subunit 1 -
  MUO14_RS20785 (MUO14_20785) - 4185255..4186061 (-) 807 WP_244752426.1 undecaprenyl-diphosphate phosphatase -
  MUO14_RS20790 (MUO14_20790) - 4186218..4186394 (-) 177 WP_244752427.1 DUF2929 family protein -
  MUO14_RS20795 (MUO14_20795) - 4186531..4187067 (+) 537 WP_244752428.1 hypothetical protein -
  MUO14_RS20800 (MUO14_20800) med 4187146..4188096 (+) 951 WP_244752429.1 BMP family ABC transporter substrate-binding protein Regulator
  MUO14_RS20805 (MUO14_20805) - 4188129..4188326 (-) 198 WP_244752430.1 hypothetical protein -
  MUO14_RS20810 (MUO14_20810) - 4188653..4189594 (+) 942 WP_244752431.1 beta-ketoacyl-ACP synthase III -
  MUO14_RS20815 (MUO14_20815) fabF 4189613..4190853 (+) 1241 Protein_4127 beta-ketoacyl-ACP synthase II -
  MUO14_RS20820 (MUO14_20820) - 4190924..4191907 (-) 984 WP_244752432.1 LCP family protein -
  MUO14_RS20825 (MUO14_20825) - 4192069..4192281 (+) 213 WP_244752433.1 hypothetical protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35449.74 Da        Isoelectric Point: 4.2514

>NTDB_id=675022 MUO14_RS20800 WP_244752429.1 4187146..4188096(+) (med) [Halobacillus shinanisalinarum strain SSTM10-2]
MKTFYILILITLMLLSGCQHPFASGHTDKVGMLVETTIHDQAWGQQGYKGLQSIQKDFGVDVYFKEGIKTESQTTQAVAE
LVDKGINVIFGHGNAYGSYFQDLHQSYPEVHFIYFNGQFSADNVTSLNFSANAMGFFAGMVAGEMTETNKIGLIAAFQWQ
PEVEGFYEGAKFQNPEADINITYTNNWEDTEKAIQLYNQMEANGADVFYPAGDMFNIPLIREIQDDAHYGIGYVSDQSFV
AENTVLTSTVQRVDRVYNITMEKFLAGELPGKVIRFGFQEGAIEMGEYSPVVPEKFQFVMDNTVKSYEETGQLPNQ

Nucleotide


Download         Length: 951 bp        

>NTDB_id=675022 MUO14_RS20800 WP_244752429.1 4187146..4188096(+) (med) [Halobacillus shinanisalinarum strain SSTM10-2]
GTGAAAACTTTTTATATTTTGATTCTAATCACACTTATGCTGCTATCGGGGTGTCAGCATCCATTTGCATCAGGACATAC
AGATAAAGTAGGAATGCTTGTTGAAACTACCATCCATGATCAAGCATGGGGGCAACAAGGTTACAAAGGTCTGCAGTCTA
TTCAGAAGGACTTCGGAGTAGATGTTTATTTTAAAGAAGGAATAAAAACCGAATCTCAAACAACTCAAGCTGTTGCTGAA
CTTGTTGATAAAGGGATAAATGTTATTTTCGGTCATGGTAATGCATATGGCAGTTACTTTCAAGATCTTCATCAATCCTA
TCCAGAAGTTCATTTTATATATTTCAATGGTCAGTTTTCGGCTGATAATGTTACGAGTTTAAACTTCAGTGCAAATGCCA
TGGGGTTCTTTGCTGGCATGGTTGCTGGAGAAATGACAGAAACCAATAAAATTGGCTTAATAGCAGCCTTTCAGTGGCAG
CCCGAGGTAGAAGGATTTTATGAAGGAGCTAAATTCCAAAATCCAGAGGCTGATATTAATATTACCTATACAAATAACTG
GGAAGACACGGAGAAGGCGATTCAACTGTACAACCAAATGGAAGCAAATGGAGCAGATGTATTCTATCCAGCTGGGGATA
TGTTTAATATCCCATTAATTCGTGAAATCCAAGACGATGCCCATTATGGGATCGGTTATGTATCAGATCAGTCCTTCGTT
GCGGAGAATACTGTTCTGACAAGTACTGTGCAGCGAGTTGACCGTGTTTATAATATTACGATGGAGAAGTTTTTGGCAGG
TGAGTTACCAGGTAAGGTCATTCGTTTTGGTTTTCAGGAAGGAGCAATAGAAATGGGCGAATATAGTCCCGTGGTTCCTG
AAAAGTTTCAATTTGTAATGGATAATACTGTAAAAAGCTACGAGGAAACGGGTCAATTACCTAACCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

48.254

99.684

0.481