Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MUO14_RS13710 Genome accession   NZ_CP095074
Coordinates   2732945..2733898 (+) Length   317 a.a.
NCBI ID   WP_244751223.1    Uniprot ID   -
Organism   Halobacillus shinanisalinarum strain SSTM10-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2727945..2738898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO14_RS13685 (MUO14_13685) - 2728779..2729198 (-) 420 WP_244751219.1 MarR family winged helix-turn-helix transcriptional regulator -
  MUO14_RS13690 (MUO14_13690) - 2729388..2730212 (+) 825 WP_244751220.1 aldo/keto reductase -
  MUO14_RS13695 (MUO14_13695) - 2730334..2730936 (+) 603 WP_244751221.1 biotin transporter BioY -
  MUO14_RS13700 (MUO14_13700) bioB 2730949..2731940 (+) 992 Protein_2710 biotin synthase BioB -
  MUO14_RS13705 (MUO14_13705) - 2732175..2732756 (-) 582 WP_244751222.1 TetR/AcrR family transcriptional regulator -
  MUO14_RS13710 (MUO14_13710) ceuB 2732945..2733898 (+) 954 WP_244751223.1 ABC transporter permease Machinery gene
  MUO14_RS13715 (MUO14_13715) - 2733888..2734832 (+) 945 WP_244751224.1 iron chelate uptake ABC transporter family permease subunit -
  MUO14_RS13720 (MUO14_13720) - 2734829..2735584 (+) 756 WP_244751225.1 ABC transporter ATP-binding protein -
  MUO14_RS13725 (MUO14_13725) - 2735608..2736540 (+) 933 WP_244751226.1 siderophore ABC transporter substrate-binding protein -
  MUO14_RS13730 (MUO14_13730) - 2736672..2737637 (+) 966 WP_244751227.1 nuclease-related domain-containing protein -
  MUO14_RS13735 (MUO14_13735) uvsE 2737789..2738748 (+) 960 WP_244751228.1 UV DNA damage repair endonuclease UvsE -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34901.86 Da        Isoelectric Point: 9.3537

>NTDB_id=675017 MUO14_RS13710 WP_244751223.1 2732945..2733898(+) (ceuB) [Halobacillus shinanisalinarum strain SSTM10-2]
MKISYTLSVLIILSIVSLFVGVSDVSILDAFQLTREQIDILMVSRFPRLVSILIAGASISICGLIMQQLTRNKFVSPTTA
GTFDSARLGVLVSLLVFTSASPMVKMMVAFGFALLGTFIFMQILERIPFKDTIFIPLVGLMFGNVISSISTFFALKYNLV
QNMSSWLHGDFSMIMEGRYEMMFISIPFLVIAYLYANQFTIAGVGEDFAKNVGLNYRQVVNIGLAIVAMVTASVVLTVGM
IPFLGLIIPNIVTYYYGDHLKKSIIQTAIIGAAFVLACDILGRVIIYPYEISISVTVGVIGSGIFIYLLMRRRSYAT

Nucleotide


Download         Length: 954 bp        

>NTDB_id=675017 MUO14_RS13710 WP_244751223.1 2732945..2733898(+) (ceuB) [Halobacillus shinanisalinarum strain SSTM10-2]
ATGAAAATTAGCTACACACTTTCCGTTCTTATCATTTTAAGTATTGTGTCCCTGTTCGTTGGCGTGTCGGATGTCTCGAT
CTTAGATGCTTTTCAATTAACCCGGGAACAGATTGATATTTTAATGGTCAGTCGTTTTCCGAGATTAGTGAGCATTCTTA
TTGCTGGAGCAAGCATAAGTATTTGCGGCCTGATTATGCAGCAACTGACGAGGAACAAATTCGTTTCACCCACAACAGCC
GGGACTTTTGATTCAGCACGACTCGGTGTATTAGTATCGTTACTCGTTTTCACATCGGCAAGTCCTATGGTGAAAATGAT
GGTGGCGTTTGGTTTTGCTCTTTTAGGGACGTTTATTTTCATGCAAATCCTGGAACGGATTCCCTTCAAGGACACGATTT
TCATCCCACTCGTTGGTTTAATGTTTGGGAATGTGATCAGTTCGATTTCTACATTTTTCGCGTTGAAATACAACCTTGTT
CAAAACATGTCGTCCTGGCTGCATGGTGATTTCTCGATGATTATGGAAGGTCGTTATGAAATGATGTTCATTTCAATTCC
TTTTCTGGTGATTGCCTATTTATACGCAAATCAATTTACCATAGCGGGAGTAGGGGAGGATTTTGCCAAAAATGTGGGAT
TAAACTATAGGCAGGTCGTGAACATTGGGTTAGCCATTGTGGCGATGGTGACGGCATCTGTTGTCCTGACAGTAGGCATG
ATTCCATTCTTAGGCTTAATCATTCCAAATATCGTAACGTACTACTACGGGGATCATTTGAAGAAGAGTATCATTCAAAC
AGCGATTATCGGTGCGGCATTCGTGCTTGCCTGTGATATCTTAGGTCGAGTGATCATTTATCCTTATGAGATTTCAATCA
GTGTAACCGTTGGCGTCATCGGTAGCGGAATATTTATTTACCTACTGATGAGGAGGCGGTCGTATGCAACTTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.645

97.792

0.495