Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MUN89_RS11305 Genome accession   NZ_CP095073
Coordinates   2205929..2207650 (+) Length   573 a.a.
NCBI ID   WP_244707788.1    Uniprot ID   -
Organism   Halobacillus salinarum strain SSBR10-3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2200929..2212650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUN89_RS11285 (MUN89_11285) - 2202025..2202624 (+) 600 WP_244707780.1 hypothetical protein -
  MUN89_RS11290 (MUN89_11290) dxs 2202643..2204535 (+) 1893 WP_244707782.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MUN89_RS11295 (MUN89_11295) - 2204541..2205362 (+) 822 WP_244707784.1 TlyA family RNA methyltransferase -
  MUN89_RS11300 (MUN89_11300) ahrC 2205463..2205912 (+) 450 WP_244707786.1 transcriptional regulator AhrC/ArgR -
  MUN89_RS11305 (MUN89_11305) recN 2205929..2207650 (+) 1722 WP_244707788.1 DNA repair protein RecN Machinery gene
  MUN89_RS11310 (MUN89_11310) spoIVB 2207867..2209111 (+) 1245 WP_244707789.1 SpoIVB peptidase -
  MUN89_RS11315 (MUN89_11315) spo0A 2209347..2210126 (+) 780 WP_244707791.1 sporulation transcription factor Spo0A -
  MUN89_RS11320 (MUN89_11320) - 2210291..2211640 (+) 1350 WP_244707792.1 aspartate kinase -
  MUN89_RS11325 (MUN89_11325) - 2211718..2212464 (-) 747 WP_244707794.1 PolC-type DNA polymerase III -

Sequence

Protein


Download         Length: 573 a.a.        Molecular weight: 65301.83 Da        Isoelectric Point: 4.7235

>NTDB_id=674973 MUN89_RS11305 WP_244707788.1 2205929..2207650(+) (recN) [Halobacillus salinarum strain SSBR10-3]
MLTELSIRDFAIIDEVSITFKEGLTVLTGETGAGKSIIIDAIQLLAGGRGSVEFVRHGTKKAEIEGLFIVEDAHPVYKKA
GQFGIDISEDGMVVLQRTITNQGKSICRVNGKLVTLAILKEFGQSLIDIHSQHETQSLMDPDRHIELLDLFSAEQLSSSI
EDYQSVFEKYQMLNKRFKELSENEQEMAQRLDLLEFQFRELQEAELVPKEDEELSDERNKLMNYEKIYQGIHDAYHSLYG
EQKGLDWLSHAMTSLESTADFDEQLSKLSEELSNAYYVIEEITFQLSSQMNELEFDPERLNQIEGRLNEINRLKKKYGQT
VENMLEYASRIEEEIDEIKNKDSHLHRLEQQIHELGQDAVLDAKNIHDIRKISSEKLAEYVHEELKDLYLEKAAFEVDIQ
IKEGKSTDPVFEDRHVKLQKNGFDIVKFLITTNPGEPLKELHKVASGGEMSRIMLALKRIFSRHQGVTSVIFDEVDTGVS
GRVAQAIAEKIYGISKGSQVLCISHLPQVAAMADTHVRIEKQVHDDRTSTVVKEMNEEEKAEEISRMITGAELTETTFEH
AKELLAMASKHKQ

Nucleotide


Download         Length: 1722 bp        

>NTDB_id=674973 MUN89_RS11305 WP_244707788.1 2205929..2207650(+) (recN) [Halobacillus salinarum strain SSBR10-3]
ATGTTAACCGAATTATCCATACGCGATTTCGCGATAATCGATGAAGTGTCTATCACTTTTAAAGAAGGTCTTACTGTTTT
AACAGGGGAAACAGGTGCAGGGAAATCCATTATTATTGATGCGATCCAGCTGCTTGCCGGCGGAAGAGGTTCCGTTGAAT
TTGTCCGTCATGGCACAAAAAAAGCAGAAATTGAAGGATTATTTATTGTAGAAGACGCGCATCCTGTGTACAAAAAAGCA
GGGCAGTTTGGTATCGATATCAGTGAGGATGGAATGGTTGTCCTTCAAAGAACCATTACGAATCAAGGCAAAAGCATCTG
CCGTGTAAATGGCAAGCTTGTTACTCTTGCGATCCTTAAAGAGTTCGGCCAGTCTTTAATTGATATTCACAGTCAGCATG
AAACCCAATCTCTAATGGATCCTGATCGTCATATAGAACTGCTTGACCTTTTTTCAGCTGAACAGCTCTCTTCTTCAATT
GAGGATTATCAATCAGTATTTGAAAAATATCAAATGCTCAATAAACGTTTTAAAGAATTGAGTGAAAATGAACAGGAAAT
GGCTCAGCGTTTGGATTTGCTTGAATTTCAGTTTCGTGAGCTTCAGGAAGCTGAGCTTGTTCCTAAAGAGGATGAGGAAC
TCTCGGATGAACGCAATAAATTGATGAATTATGAAAAAATATACCAAGGCATTCACGATGCTTATCATTCACTGTATGGG
GAGCAAAAGGGATTGGACTGGCTGAGCCATGCCATGACTTCTCTAGAGAGTACAGCAGACTTTGATGAGCAGCTATCTAA
ACTTTCGGAGGAACTCAGTAACGCCTATTACGTCATCGAAGAAATAACCTTTCAATTAAGCAGCCAAATGAATGAGCTTG
AATTTGATCCGGAACGCCTGAACCAAATTGAAGGACGGTTAAATGAAATCAACCGCTTGAAAAAGAAATATGGACAAACA
GTAGAAAATATGCTGGAATATGCTTCAAGAATTGAAGAAGAAATCGATGAAATAAAAAATAAAGATTCGCACCTGCACCG
GCTTGAACAACAAATTCATGAACTTGGGCAAGATGCTGTGCTGGATGCAAAAAACATTCATGATATCCGGAAGATCTCCT
CTGAAAAGTTAGCTGAGTATGTCCATGAAGAGCTCAAGGATCTATATCTGGAAAAAGCTGCCTTTGAAGTCGATATTCAA
ATCAAAGAAGGCAAGTCGACAGACCCTGTCTTCGAAGACCGGCATGTGAAACTTCAAAAAAATGGGTTTGATATTGTGAA
ATTTCTGATCACGACCAATCCTGGCGAGCCACTAAAAGAGCTTCATAAAGTCGCCTCCGGCGGAGAAATGTCAAGGATCA
TGCTGGCATTAAAAAGGATTTTCTCCCGTCATCAAGGTGTTACCAGTGTCATTTTTGATGAAGTGGACACAGGTGTAAGC
GGCCGTGTTGCTCAAGCCATCGCTGAAAAAATTTATGGAATTTCCAAAGGCTCTCAGGTGCTCTGTATTTCTCACCTTCC
TCAAGTAGCTGCCATGGCAGATACTCATGTAAGAATTGAAAAGCAGGTGCATGATGATCGAACTTCTACGGTCGTAAAAG
AGATGAATGAAGAAGAAAAAGCCGAGGAAATTTCGCGAATGATTACAGGTGCCGAACTCACTGAAACCACATTTGAACAT
GCAAAAGAGCTTTTGGCTATGGCATCCAAGCATAAGCAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

56.272

100

0.564