Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OH781_RS17360 Genome accession   NZ_CP109376
Coordinates   3891810..3892934 (+) Length   374 a.a.
NCBI ID   WP_313937906.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01550     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3886810..3897934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH781_RS17345 (OH781_17380) - 3887405..3888274 (+) 870 WP_329451629.1 hypothetical protein -
  OH781_RS17350 (OH781_17385) - 3888307..3890076 (-) 1770 WP_406371417.1 BACON domain-containing protein -
  OH781_RS17355 (OH781_17390) radA/sms 3890317..3891729 (+) 1413 WP_406371419.1 DNA repair protein RadA Machinery gene
  OH781_RS17360 (OH781_17395) disA 3891810..3892934 (+) 1125 WP_313937906.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OH781_RS17365 (OH781_17400) - 3893095..3893904 (-) 810 WP_354392005.1 hypothetical protein -
  OH781_RS17370 (OH781_17405) - 3894756..3895658 (+) 903 WP_406371421.1 A/G-specific adenine glycosylase -
  OH781_RS17375 (OH781_17410) - 3895834..3896484 (+) 651 WP_356476418.1 SigE family RNA polymerase sigma factor -
  OH781_RS17380 (OH781_17415) - 3896472..3897161 (+) 690 WP_406371423.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40361.28 Da        Isoelectric Point: 4.8644

>NTDB_id=674967 OH781_RS17360 WP_313937906.1 3891810..3892934(+) (disA) [Streptomyces sp. NBC_01550]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674967 OH781_RS17360 WP_313937906.1 3891810..3892934(+) (disA) [Streptomyces sp. NBC_01550]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGTGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTCTACGTGGACGGGGAGCGCCGGGTGCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATACGTGGTGGAGCTGGGCACCGACGGGCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAACTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAGCTGCTCGAACTTCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GATCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCAGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436