Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MUN88_RS19445 Genome accession   NZ_CP095072
Coordinates   4035227..4036183 (-) Length   318 a.a.
NCBI ID   WP_244718361.1    Uniprot ID   -
Organism   Gracilibacillus caseinilyticus strain SSWR10-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4030227..4041183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUN88_RS19420 (MUN88_19420) - 4030354..4030821 (-) 468 WP_244718349.1 chemotaxis protein CheW -
  MUN88_RS19425 (MUN88_19425) - 4030841..4031308 (-) 468 WP_244718352.1 chemotaxis protein CheX -
  MUN88_RS19430 (MUN88_19430) - 4032118..4033188 (-) 1071 WP_244718355.1 siderophore ABC transporter substrate-binding protein -
  MUN88_RS19435 (MUN88_19435) - 4033520..4034287 (-) 768 WP_244718357.1 ABC transporter ATP-binding protein -
  MUN88_RS19440 (MUN88_19440) - 4034287..4035240 (-) 954 WP_244718359.1 iron chelate uptake ABC transporter family permease subunit -
  MUN88_RS19445 (MUN88_19445) ceuB 4035227..4036183 (-) 957 WP_244718361.1 ABC transporter permease Machinery gene
  MUN88_RS19450 (MUN88_19450) - 4036426..4037001 (+) 576 WP_244718363.1 aminodeoxychorismate/anthranilate synthase component II -
  MUN88_RS19455 (MUN88_19455) pabB 4036998..4038725 (+) 1728 WP_244718365.1 aminodeoxychorismate synthase component I -
  MUN88_RS19460 (MUN88_19460) - 4038797..4039225 (+) 429 WP_244718367.1 BrxA/BrxB family bacilliredoxin -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35034.42 Da        Isoelectric Point: 9.7129

>NTDB_id=674942 MUN88_RS19445 WP_244718361.1 4035227..4036183(-) (ceuB) [Gracilibacillus caseinilyticus strain SSWR10-1]
MRLWILIICAIILSFISLFVGAIDIKVSDLLDFHSDKFQIFLVSRVPRLLAIIMAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGIMISMLFLTNVTYTQQVIFSFAFALAGTFIFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFGYEADIL
QNISSWLMGSFTLIISGRYELLYVSIPAVVLAYLYANKFTVAGMGEDFAKNIGLSYKFVLNIGLVLVAIISTSVVLTVGM
IPFLGLIVPNIVSLYLGDNLRKTIPHTMVLGIVFLLICDIMGRIIIHPYEIPVNVTVAVIGSAIFLIMLLRGRVYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=674942 MUN88_RS19445 WP_244718361.1 4035227..4036183(-) (ceuB) [Gracilibacillus caseinilyticus strain SSWR10-1]
ATGAGATTATGGATATTAATCATTTGTGCCATTATCCTGTCATTTATTTCGCTTTTTGTAGGTGCGATAGATATTAAAGT
AAGTGATTTGCTAGACTTTCATTCTGATAAGTTTCAAATCTTTTTAGTTAGTAGAGTACCTCGGTTGTTGGCGATTATTA
TGGCAGGGGCAGGAATGAGTATCGCGGGTTTAATTATGCAAAGTTTGAGTCGTAATAAATTTGTTTCTCCTACAACTGCA
GGAACATTAGATGCGGCGAAATTAGGAATCATGATTTCCATGCTGTTTTTAACGAATGTTACATATACACAGCAAGTTAT
TTTCAGTTTTGCATTTGCTTTAGCAGGAACATTTATTTTTATGCAAATTTTAGATCGTATAAAATTTAAAGATGTTATTT
TTGTACCATTAATCGGGATAATGTATGGAAACATTTTATCATCGATAACGACTTTTTTTGGTTATGAAGCAGATATTCTT
CAAAACATTTCATCTTGGTTGATGGGGAGTTTCACATTAATTATTTCTGGTCGTTATGAACTGTTATATGTCAGTATACC
AGCAGTTGTATTGGCATACCTTTATGCGAACAAGTTTACAGTTGCTGGAATGGGAGAGGATTTTGCCAAAAATATCGGAT
TAAGCTATAAGTTCGTGCTTAATATTGGGCTCGTTCTAGTTGCAATCATATCTACATCCGTCGTACTAACTGTCGGGATG
ATACCATTCTTAGGTCTAATTGTCCCTAATATTGTCTCTCTTTATCTGGGGGATAATCTAAGAAAAACCATTCCCCATAC
AATGGTACTTGGGATTGTATTTCTATTAATTTGTGACATTATGGGTCGTATCATCATTCATCCTTATGAGATACCTGTAA
ACGTAACCGTTGCTGTAATCGGAAGTGCGATCTTCCTAATTATGTTACTTAGGGGGAGAGTATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

99.371

0.516