Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MUN87_RS21985 Genome accession   NZ_CP095071
Coordinates   4750772..4751728 (+) Length   318 a.a.
NCBI ID   WP_244743979.1    Uniprot ID   -
Organism   Gracilibacillus salinarum strain SSPM10-3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4745772..4756728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUN87_RS21965 (MUN87_21965) - 4745974..4747218 (+) 1245 WP_244743975.1 NlpC/P60 family protein -
  MUN87_RS21970 (MUN87_21970) - 4747740..4748168 (-) 429 WP_244743976.1 BrxA/BrxB family bacilliredoxin -
  MUN87_RS21975 (MUN87_21975) pabB 4748224..4749963 (-) 1740 WP_244743977.1 aminodeoxychorismate synthase component I -
  MUN87_RS21980 (MUN87_21980) - 4749960..4750535 (-) 576 WP_244743978.1 aminodeoxychorismate/anthranilate synthase component II -
  MUN87_RS21985 (MUN87_21985) ceuB 4750772..4751728 (+) 957 WP_244743979.1 ABC transporter permease Machinery gene
  MUN87_RS21990 (MUN87_21990) - 4751715..4752668 (+) 954 WP_244743980.1 iron chelate uptake ABC transporter family permease subunit -
  MUN87_RS21995 (MUN87_21995) - 4752668..4753435 (+) 768 WP_244748049.1 ABC transporter ATP-binding protein -
  MUN87_RS22000 (MUN87_22000) - 4753829..4754902 (+) 1074 WP_244743981.1 siderophore ABC transporter substrate-binding protein -
  MUN87_RS22005 (MUN87_22005) - 4755479..4755946 (+) 468 WP_244743982.1 chemotaxis protein CheX -
  MUN87_RS22010 (MUN87_22010) - 4755966..4756433 (+) 468 WP_244743983.1 chemotaxis protein CheW -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34996.38 Da        Isoelectric Point: 9.8329

>NTDB_id=674909 MUN87_RS21985 WP_244743979.1 4750772..4751728(+) (ceuB) [Gracilibacillus salinarum strain SSPM10-3]
MRLWMLLIIAIILSFISLFVGAIDIKISDLLDFHSDKFQIFLVSRVPRLLAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGIMISMLFLTNVTYTQQVIFSFAFALAGTFIFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFGYEADIL
QNISSWLMGSFTLIIAGRYELLYVSIPAVILAYLYANKFTVAGMGEDFAKNIGLSYKFVLNIGLVLVAIISTSVVLTVGM
IPFLGLIVPNIVSLYLGDNLRKTIPHTMVLGVVFLLICDILGRIIIHPYEIPVNVTVAVIGSAIFLIMLLRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=674909 MUN87_RS21985 WP_244743979.1 4750772..4751728(+) (ceuB) [Gracilibacillus salinarum strain SSPM10-3]
ATGAGATTATGGATGCTATTAATTATTGCCATTATACTGTCATTTATATCGCTTTTTGTAGGTGCGATAGATATTAAGAT
AAGTGATTTGCTCGACTTTCATTCTGATAAGTTTCAAATCTTCTTAGTTAGTAGAGTACCTCGATTACTGGCGATTATTT
TGGCAGGGGCCGGAATGAGTATTGCAGGCTTAATTATGCAAAGTTTGAGTCGCAATAAATTTGTTTCTCCTACAACGGCA
GGAACATTGGATGCAGCTAAATTAGGAATCATGATTTCCATGCTGTTTCTAACGAACGTTACATATACACAGCAAGTTAT
ATTTAGTTTTGCATTTGCTTTAGCAGGAACATTTATTTTTATGCAAATTTTAGATCGAATAAAATTTAAAGATGTTATTT
TTGTACCATTAATCGGGATTATGTATGGAAATATCCTATCATCTATCACAACGTTCTTCGGATATGAAGCAGACATTCTG
CAAAACATTTCATCTTGGCTGATGGGCAGCTTCACATTAATTATTGCTGGCCGTTATGAATTGTTATATGTCAGTATACC
AGCTGTTATATTGGCATACCTTTATGCAAACAAGTTCACCGTAGCTGGAATGGGGGAGGATTTTGCCAAGAATATTGGAT
TAAGCTATAAGTTCGTACTTAACATTGGGCTGGTTCTAGTTGCAATCATCTCTACTTCCGTCGTTCTAACTGTTGGTATG
ATACCTTTCTTAGGACTGATTGTGCCAAATATTGTCTCTCTTTATCTTGGTGATAACTTACGAAAAACCATTCCACATAC
AATGGTTCTTGGGGTTGTATTTCTATTAATCTGTGACATTTTGGGTCGTATCATTATTCATCCATATGAGATACCAGTAA
ACGTAACGGTTGCGGTAATCGGAAGTGCGATCTTCTTAATTATGTTACTTAGGGGGAGAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.698

97.799

0.525