Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHB33_RS19655 Genome accession   NZ_CP109365
Coordinates   4482434..4483558 (+) Length   374 a.a.
NCBI ID   WP_081218647.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01558     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4477434..4488558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB33_RS19640 (OHB33_19620) - 4477989..4478744 (+) 756 WP_239155511.1 hypothetical protein -
  OHB33_RS19645 (OHB33_19625) - 4478797..4480644 (-) 1848 WP_267051477.1 hypothetical protein -
  OHB33_RS19650 (OHB33_19630) radA/sms 4480956..4482365 (+) 1410 WP_164372956.1 DNA repair protein RadA Machinery gene
  OHB33_RS19655 (OHB33_19635) disA 4482434..4483558 (+) 1125 WP_081218647.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB33_RS19660 (OHB33_19640) - 4483662..4484492 (-) 831 WP_326842652.1 hypothetical protein -
  OHB33_RS19665 (OHB33_19645) - 4484684..4485601 (+) 918 WP_164372954.1 A/G-specific adenine glycosylase -
  OHB33_RS19670 (OHB33_19650) - 4485863..4486414 (+) 552 WP_164372953.1 SigE family RNA polymerase sigma factor -
  OHB33_RS19675 (OHB33_19655) - 4486456..4487052 (+) 597 WP_164372952.1 hypothetical protein -
  OHB33_RS19680 (OHB33_19660) cseB 4487072..4487779 (+) 708 WP_164372951.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40158.90 Da        Isoelectric Point: 4.9234

>NTDB_id=674900 OHB33_RS19655 WP_081218647.1 4482434..4483558(+) (disA) [Streptomyces sp. NBC_01558]
MAANDRAAAPGKSGGSSGADGQMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALFELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674900 OHB33_RS19655 WP_081218647.1 4482434..4483558(+) (disA) [Streptomyces sp. NBC_01558]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCAGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCACTGCGTGACGGACTCGAACGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGATTCATCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTGCGGGCGGGTGTGCAGCTGGTGCC
CGACCCCACGATCCCGACGGAGGAGACGGGTACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTGTCCCGTGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGACGTCTTCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGCGAGCTGGTCGTCCGGGACTATGTGCCGGAACCGACCGCGAAGCGGTCCCGCACCGTCGACGA
GGCACTCTTCGAGCTGGACGCGCTCAGCCACGCGGAGCTTCTCGAACTGTCCACGGTGGCAAGGGCGTTGGGTTACACCG
GTTCCCCGGAGGCGCTCGACTCGGCGGTGTCCCCGCGCGGATTCCGGCTGCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436