Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MUN87_RS03400 Genome accession   NZ_CP095071
Coordinates   674101..675819 (-) Length   572 a.a.
NCBI ID   WP_244746259.1    Uniprot ID   -
Organism   Gracilibacillus salinarum strain SSPM10-3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 669101..680819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUN87_RS03380 (MUN87_03380) safA 669747..670349 (-) 603 WP_244746256.1 SafA/ExsA family spore coat assembly protein -
  MUN87_RS03385 (MUN87_03385) - 670483..671589 (+) 1107 WP_369413994.1 mechanosensitive ion channel family protein -
  MUN87_RS03390 (MUN87_03390) spo0A 671630..672409 (-) 780 WP_244746257.1 sporulation transcription factor Spo0A -
  MUN87_RS03395 (MUN87_03395) spoIVB 672670..673962 (-) 1293 WP_244746258.1 SpoIVB peptidase -
  MUN87_RS03400 (MUN87_03400) recN 674101..675819 (-) 1719 WP_244746259.1 DNA repair protein RecN Machinery gene
  MUN87_RS03405 (MUN87_03405) argR 675836..676285 (-) 450 WP_244716696.1 transcriptional regulator AhrC/ArgR -
  MUN87_RS03410 (MUN87_03410) - 676350..677168 (-) 819 WP_244746260.1 TlyA family RNA methyltransferase -
  MUN87_RS03415 (MUN87_03415) dxs 677174..679072 (-) 1899 WP_244746261.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MUN87_RS03420 (MUN87_03420) - 679108..679683 (-) 576 WP_244746262.1 hypothetical protein -

Sequence

Protein


Download         Length: 572 a.a.        Molecular weight: 65442.98 Da        Isoelectric Point: 5.7969

>NTDB_id=674877 MUN87_RS03400 WP_244746259.1 674101..675819(-) (recN) [Gracilibacillus salinarum strain SSPM10-3]
MLTELSIKNFAIIEQLSISFQSGLTVLTGETGAGKSIIIDALGLLIGGRGSVEYVRHGEKKAELEGLFIIEDLEHPVYQK
TKELGIDINDDQMLVLHRTISHSGKSICRINGKLTTLAILKEIGQSVLDIHSQHETQALLNKEKHLELLDSYYQSNHPDF
KKSYQHLYKHWKQLKDKFEASNKNEQELAQRMDLLDFQLKEIQNADLQPNEDELLTEERNELQHFEKIHSNLNDAYNALH
GEQKGLDWMSHAANHLEEAGEHHQAVKKMHQDYIDHYYLMEEISYQIRQQLESMDYEPGRLEVIESRLHEIDQLKRKYGQ
SVEEIMTYSAKIEEELDEIKHRDQHLENLSHSLQEAAHDLLVEAKELYLLRKNAAKQLEKAVLAELKDLYMDKTVFEVDV
SIPNREQGISFEGKKVSPHPHGIDQARFLISTNPGEPVKDLDRIASGGEMSRIMLALKNIFSKHQGITSVIFDEVDTGVS
GRVAQSMAEKIHNISSGSQVLCITHLPQVASIADTHLRIEKIVENNRTHTSLQELSFEQRIDEIGKMITGEELTTASKTH
ARELIEMNHKHK

Nucleotide


Download         Length: 1719 bp        

>NTDB_id=674877 MUN87_RS03400 WP_244746259.1 674101..675819(-) (recN) [Gracilibacillus salinarum strain SSPM10-3]
ATGTTAACGGAATTATCGATTAAAAATTTTGCGATAATAGAGCAATTATCCATATCATTTCAATCCGGTTTAACGGTTTT
AACGGGAGAGACTGGTGCTGGTAAATCCATTATTATAGATGCACTTGGTTTGCTGATTGGTGGAAGAGGATCGGTCGAAT
ATGTACGTCATGGTGAAAAAAAAGCAGAATTAGAAGGACTATTTATTATAGAAGATCTTGAACACCCTGTTTATCAAAAA
ACAAAAGAATTGGGCATTGATATTAATGATGACCAAATGCTTGTGTTACATCGAACCATATCACATTCAGGCAAAAGTAT
ATGCAGAATTAATGGCAAATTAACGACATTAGCTATTTTGAAAGAAATCGGACAGAGTGTTCTTGATATCCATAGTCAGC
ACGAAACACAGGCATTATTAAATAAAGAGAAACATTTGGAACTTTTAGATTCTTATTATCAGTCAAATCATCCAGATTTC
AAAAAATCCTATCAGCATTTGTATAAACATTGGAAACAGCTAAAAGATAAATTTGAGGCAAGTAACAAAAATGAACAAGA
ATTAGCACAGCGTATGGATTTATTAGATTTTCAACTGAAAGAAATCCAGAATGCCGATTTGCAGCCAAATGAAGATGAGT
TACTGACAGAAGAACGAAACGAATTACAGCATTTTGAGAAAATCCACAGCAACTTAAATGATGCCTATAATGCACTTCAC
GGGGAGCAAAAAGGATTGGATTGGATGTCACACGCTGCCAATCATTTAGAGGAAGCAGGAGAACATCATCAGGCTGTAAA
AAAAATGCATCAAGACTATATTGATCATTATTATTTAATGGAGGAAATTTCGTATCAAATCCGGCAGCAACTGGAAAGTA
TGGATTATGAACCAGGTCGATTAGAAGTAATTGAATCCCGTTTACATGAAATTGATCAACTGAAGCGTAAGTATGGTCAA
TCCGTTGAGGAAATCATGACATACAGCGCGAAAATCGAAGAAGAATTAGATGAAATTAAACATCGTGACCAGCATCTTGA
AAATCTATCCCATTCCTTACAGGAAGCAGCTCATGATTTACTTGTAGAAGCTAAAGAATTGTATCTGCTAAGAAAAAACG
CTGCAAAACAGTTAGAGAAAGCGGTATTGGCAGAACTCAAAGATCTCTATATGGATAAAACGGTTTTTGAAGTAGATGTT
TCCATACCAAATCGTGAACAAGGTATATCATTTGAAGGTAAAAAAGTTTCTCCGCACCCTCACGGAATAGATCAGGCTAG
ATTTTTAATTTCTACAAATCCAGGTGAACCTGTAAAGGATCTGGATCGTATTGCTTCAGGCGGGGAAATGTCTCGGATAA
TGCTTGCTTTAAAGAATATTTTCTCCAAGCACCAAGGTATTACGAGTGTCATTTTCGACGAAGTTGATACTGGTGTAAGT
GGTCGTGTTGCGCAATCTATGGCTGAGAAAATTCATAATATTTCCAGCGGATCGCAAGTTCTTTGCATTACACATTTACC
TCAGGTTGCCTCTATTGCCGATACGCACTTAAGAATCGAAAAGATTGTAGAGAATAATCGTACACATACGTCATTGCAAG
AATTAAGCTTTGAACAACGTATTGATGAAATTGGTAAAATGATAACCGGTGAAGAATTAACAACTGCATCCAAGACTCAT
GCACGCGAGCTTATTGAGATGAATCACAAACATAAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.817

99.301

0.524