Detailed information NTG0067467

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R48_RS23285
• Genome accession: NZ_AP022298
• Coordinates: 4870188..4871213 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain BEC1-S17-ESBL-09
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4865188..4876213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R48_RS23265 (BE1S17E09_45210)	metJ	4866373..4866690 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R48_RS23270 (BE1S17E09_45220)	yiiX	4866750..4867358 (+)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
H7R48_RS23275 (BE1S17E09_45230)	rpmE	4867419..4867631 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R48_RS23280 (BE1S17E09_45240)	priA	4867834..4870032 (+)	2199	WP_001309112.1	primosomal protein N'	Machinery gene
H7R48_RS23285 (BE1S17E09_45250)	cytR	4870188..4871213 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R48_RS23290 (BE1S17E09_45260)	ftsN	4871305..4872264 (+)	960	WP_000068828.1	cell division protein FtsN	-
H7R48_RS23295 (BE1S17E09_45270)	hslV	4872357..4872887 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R48_RS23300 (BE1S17E09_45280)	hslU	4872897..4874228 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R48_RS23305 (BE1S17E09_45290)	menA	4874295..4875221 (+)	927	WP_077557344.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R48_RS23310 (BE1S17E09_45300)	rraA	4875314..4875799 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R48_RS23315 (BE1S17E09_45310)	zapB	4875884..4876129 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=67467 H7R48_RS23285 WP_000644908.1 4870188..4871213(+) (cytR) [Escherichia coli strain BEC1-S17-ESBL-09]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67467 H7R48_RS23285 WP_000644908.1 4870188..4871213(+) (cytR) [Escherichia coli strain BEC1-S17-ESBL-09]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625