Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LEN_RS05820 Genome accession   NZ_AP014940
Coordinates   1370375..1370773 (+) Length   132 a.a.
NCBI ID   WP_031372856.1    Uniprot ID   A0AAU8MXI9
Organism   Lysobacter enzymogenes strain M497-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365375..1375773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LEN_RS05795 (LEN_1193) - 1365469..1365879 (+) 411 WP_096377028.1 VOC family protein -
  LEN_RS05800 (LEN_1194) tsaB 1366138..1366857 (+) 720 WP_096377029.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  LEN_RS05805 (LEN_1195) - 1366925..1368070 (+) 1146 WP_096377030.1 hypothetical protein -
  LEN_RS05810 (LEN_1196) - 1368198..1369082 (-) 885 WP_096377031.1 energy transducer TonB -
  LEN_RS05815 (LEN_1197) gshB 1369079..1370041 (-) 963 WP_096377032.1 glutathione synthase -
  LEN_RS05820 (LEN_1198) pilG 1370375..1370773 (+) 399 WP_031372856.1 twitching motility response regulator PilG Regulator
  LEN_RS05825 (LEN_1199) - 1370793..1371158 (+) 366 WP_074862927.1 response regulator -
  LEN_RS05830 (LEN_1200) - 1371169..1371708 (+) 540 WP_074863320.1 chemotaxis protein CheW -
  LEN_RS05835 (LEN_1201) - 1371764..1373782 (+) 2019 WP_096377033.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14822.24 Da        Isoelectric Point: 7.1364

>NTDB_id=67452 LEN_RS05820 WP_031372856.1 1370375..1370773(+) (pilG) [Lysobacter enzymogenes strain M497-1]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=67452 LEN_RS05820 WP_031372856.1 1370375..1370773(+) (pilG) [Lysobacter enzymogenes strain M497-1]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAGCGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAAGCGTTGGCCAAGATCGCCG
ACCAACAGCCGCAGATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACGTGCGCGCTCATCAAGAAC
AATCAATTGTTCAAGGGCACGCCGGTCATCATGCTGTCCTCCAAGGATGGGCTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGTTCCGAGCAATACCTGACCAAGCCATTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697

Multiple sequence alignment