Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OHA59_RS31500 Genome accession   NZ_CP109333
Coordinates   6841538..6842332 (-) Length   264 a.a.
NCBI ID   WP_406430056.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01589     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6836538..6847332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA59_RS31485 (OHA59_31495) - 6836581..6837459 (+) 879 WP_406430050.1 GNAT family N-acetyltransferase -
  OHA59_RS31490 (OHA59_31500) - 6837520..6839379 (+) 1860 WP_406430052.1 IucA/IucC family protein -
  OHA59_RS31495 (OHA59_31505) - 6839430..6841400 (+) 1971 WP_406430054.1 ATP-dependent DNA helicase -
  OHA59_RS31500 (OHA59_31510) dinR/lexA 6841538..6842332 (-) 795 WP_406430056.1 transcriptional repressor LexA Regulator
  OHA59_RS31505 (OHA59_31515) nrdR 6842878..6843390 (+) 513 WP_406430058.1 transcriptional regulator NrdR -
  OHA59_RS31510 (OHA59_31520) - 6843550..6846453 (+) 2904 WP_330246588.1 vitamin B12-dependent ribonucleotide reductase -
  OHA59_RS31515 (OHA59_31525) - 6846611..6847147 (-) 537 WP_406430060.1 TerD family protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28635.39 Da        Isoelectric Point: 7.4241

>NTDB_id=674442 OHA59_RS31500 WP_406430056.1 6841538..6842332(-) (dinR/lexA) [Streptomyces sp. NBC_01589]
MTTTADSATITAQDRSQSRLEPVHAMNDSVRNTEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=674442 OHA59_RS31500 WP_406430056.1 6841538..6842332(-) (dinR/lexA) [Streptomyces sp. NBC_01589]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAAGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACTCAGTCAGGAACACGGAGGGGCCGGAGCCGGCGCGCCCAGCGCGCTCGCTCCCCGGCCGACCTCCAGGAATCCGAG
CGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGAGTGATCGAGGTCATCCGCGACTCGGTGCAGCGACGGGGATACCCA
CCCTCGATGCGGGAGATCGGTCAGGCGGTGGGGCTGTCCAGCACGTCCTCCGTCGCCCATCAACTGATGGCTCTGGAACG
CAAGGGCTTCCTCCGCCGCGACCCTCATCGCCCGCGGGCGTACGAGGTCCGCGGTTCGGACCAGCCCAGCGCGCAGCCGA
CCGACACGACCGGCAAGCCCGCCGCTTCGTACGTACCGCTGGTCGGCCGGATCGCAGCTGGCGGACCGATCCTCGCCGAG
GAATCGGTCGAGGACGTGTTTCCGCTCCCCCGCCAGCTGGTCGGGGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGTGA
CTCGATGATCGAGGCGGCGATCTGTGACGGCGACTGGGTCACCGTGCGCCGTCAGCCCGTCGCGGAGAACGGCGACATCG
TGGCCGCCATGCTCGACGGAGAGGCGACGGTCAAGCGCTTCAAGCGGGAGGACGGCCACGTATGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATCCCTGGCGACGAGGCGACCATCCTCGGCAAGGTCGTGGCGGTGCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371