Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG978_RS30395 Genome accession   NZ_CP109327
Coordinates   6587759..6588553 (-) Length   264 a.a.
NCBI ID   WP_072488421.1    Uniprot ID   A0A1K2EW71
Organism   Streptomyces sp. NBC_01591     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6582759..6593553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG978_RS30380 (OG978_30400) - 6582876..6583691 (+) 816 WP_326768247.1 GNAT family N-acetyltransferase -
  OG978_RS30385 (OG978_30405) - 6583752..6585668 (+) 1917 WP_326768248.1 IucA/IucC family siderophore biosynthesis protein -
  OG978_RS30390 (OG978_30410) - 6585707..6587677 (+) 1971 WP_326768249.1 ATP-dependent DNA helicase -
  OG978_RS30395 (OG978_30415) dinR/lexA 6587759..6588553 (-) 795 WP_072488421.1 transcriptional repressor LexA Regulator
  OG978_RS30400 (OG978_30420) nrdR 6589075..6589587 (+) 513 WP_093898913.1 transcriptional regulator NrdR -
  OG978_RS30405 (OG978_30425) - 6589748..6592642 (+) 2895 WP_326768250.1 vitamin B12-dependent ribonucleotide reductase -
  OG978_RS30410 (OG978_30430) - 6592793..6593236 (+) 444 WP_326768251.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28660.41 Da        Isoelectric Point: 6.9854

>NTDB_id=674295 OG978_RS30395 WP_072488421.1 6587759..6588553(-) (dinR/lexA) [Streptomyces sp. NBC_01591]
MTTTADSATITAQDRSQSRFEPVHAMNDSVTNMEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=674295 OG978_RS30395 WP_072488421.1 6587759..6588553(-) (dinR/lexA) [Streptomyces sp. NBC_01591]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGATTCGAGCCGGTGCATGCCATGAA
TGACTCAGTCACGAACATGGAGGGGCCAGAGCCCGCGCGCCCAGCGCGCTCGTTGCCCGGCCGACCTCCTGGAATCCGGG
CGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGAGTGATCGAGGTGATCCGGGATTCCGTGCAGCGGCGTGGTTACCCG
CCCTCGATGCGGGAGATCGGTCAGGCCGTGGGCCTGTCCAGCACATCCTCCGTCGCCCATCAGCTGATGGCCCTGGAGCG
GAAGGGCTTCCTGCGTCGCGACCCGCACCGCCCGCGGGCGTACGAGGTCCGTGGTTCGGACCAGCCCAGTTCACAGCCCA
CCGATACGACCGGCAAGCCCGCGGCGTCGTACGTGCCGCTGGTCGGCCGGATCGCGGCCGGTGGTCCGATCCTCGCCGAG
GAGTCGGTCGAGGACGTCTTCCCTCTCCCCCGCCAGCTCGTCGGTGACGGCGAGCTGTTCGTGCTCAAGGTCGTCGGTGA
CTCGATGATCGAGGCGGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCG
TGGCAGCCATGCTGGACGGCGAGGCCACGGTCAAGCGCTTCAAGCGGGAGGACGGCCATGTCTGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATCCCGGGCGATGAGGCGACGATCCTCGGCAAGGTGGTGGCGGTGCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1K2EW71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375