Detailed information NTG0674044

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: MUO49_RS09575
• Genome accession: NZ_CP094924
• Coordinates: 1894431..1895780 (-)
• Length: 449 a.a.
• NCBI ID: WP_277558135.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 18
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	1892802..1901046	1894431..1895780	within	0

Gene organization within MGE regions

Location: 1892802..1901046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUO49_RS09575 (MUO49_09565)	ccrA	1894431..1895780 (-)	1350	WP_277558135.1	recombinase family protein	Machinery gene
MUO49_RS09580 (MUO49_09570)	-	1896014..1897801 (-)	1788	WP_024273371.1	DUF927 domain-containing protein	-
MUO49_RS09585 (MUO49_09575)	-	1897801..1898091 (-)	291	WP_001036438.1	hypothetical protein	-
MUO49_RS09590 (MUO49_09580)	-	1898230..1899279 (+)	1050	WP_024273372.1	hypothetical protein	-
MUO49_RS09595 (MUO49_09585)	-	1899556..1901046 (+)	1491	WP_024273373.1	RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52572.26 Da
• Isoelectric Point: 9.9769

>NTDB_id=674044 MUO49_RS09575 WP_277558135.1 1894431..1895780(-) (ccrA) [Staphylococcus aureus strain 18]
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRLKLNIFISLAELESDNIGEQVKNGLQEKAKQGQLITTHAPFGYDYH
NGTFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEKDDTFINRQPCQVRNIIMNPNYCGRVINQYGQFDNMFPSIVSANV
YEQAQRLRLQKQTKRTPSDNQLKQKIKCPYCNATLTNMTIRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CRDFYQNQRIYTKIKSAIDKRIKRQRNIETHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNTLYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=674044 MUO49_RS09575 WP_277558135.1 1894431..1895780(-) (ccrA) [Staphylococcus aureus strain 18]
ATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACAGAAACAGGCTATCGAAGC
AATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGACGCAAAGATAATCGTAGTGGGT
ATCGACAAATGACGCAATTAATTCAACAAGGGCAATGTGACATATTATGTTGTTATCGTCTTAATAGATTACATCGTAAT
CTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACTTATCATGTTCATATCTTAAGCGTACATGATGGTTACTTTGA
TATGGATCAAGCTTTCGACCGACTCAAGCTTAATATCTTCATCAGTTTAGCCGAACTTGAATCAGATAATATTGGAGAAC
AAGTCAAAAATGGCCTTCAAGAAAAGGCAAAACAAGGTCAATTGATTACAACACATGCGCCTTTTGGTTACGACTATCAC
AACGGAACATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTACATTAAAGGCCATGGTTA
TAAGAAAATTGCACAGTTATTAGAAAAAGATGATACGTTCATCAATCGACAACCTTGTCAAGTTCGTAATATTATCATGA
ACCCTAATTATTGTGGTCGTGTTATCAACCAATACGGTCAATTCGACAATATGTTCCCTTCTATTGTTTCAGCAAATGTA
TATGAACAAGCGCAGAGACTTCGATTGCAAAAACAAACCAAACGGACACCTTCCGATAATCAACTTAAACAAAAAATCAA
ATGCCCATATTGTAATGCAACACTTACAAATATGACCATTAGAAAAAAGAATCATACATTACGTTACTACGTCTGTCCTA
AAAACATGAATGCTTCACGCTTTGTCTGTGATTTTAAAGGCATCAATGCACAAACACTTGAAGATAAAGTATTAGAAGTG
TGCCGAGACTTTTATCAAAATCAACGCATCTACACAAAAATTAAAAGTGCGATTGACAAACGCATCAAAAGACAAAGAAA
CATAGAAACACATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCATTGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACGTCAACAACCGCAACGCACTACATCTATCAATGGTCATCAAATACAACACACCATTCAA
AATATTATTCAAAAACGTTTCACGTTAAACACATTGTACCCCTATATTGAAACCATTCACATTACGAAAGATAAAAATCT
TATAGGAATCTATTTCAAAAATGAACCACTCAATATCGTCAATCAAACCATGCAATCATCGATTGCATAA

Domains

Predicted by InterproScan.

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-321)

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase (Recombinase) (169-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus N315	94.432	100	0.944
ccrA	Staphylococcus aureus COL	76.615	100	0.766