Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUO47_RS05550 Genome accession   NZ_CP094923
Coordinates   1099730..1100446 (+) Length   238 a.a.
NCBI ID   WP_000688498.1    Uniprot ID   Q2VG52
Organism   Staphylococcus aureus strain 1824     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1094730..1105446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO47_RS05520 (MUO47_05505) - 1094950..1095576 (+) 627 WP_000522384.1 nitroreductase family protein -
  MUO47_RS05525 (MUO47_05510) - 1095937..1096722 (+) 786 WP_000867940.1 carbon-nitrogen family hydrolase -
  MUO47_RS05530 (MUO47_05515) hld 1097318..1097398 (-) 81 WP_000046022.1 delta-hemolysin -
  MUO47_RS05535 (MUO47_05520) agrB 1097688..1098257 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  MUO47_RS05540 (MUO47_05525) - 1098254..1098394 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  MUO47_RS05545 (MUO47_05530) - 1098419..1099711 (+) 1293 WP_031929778.1 GHKL domain-containing protein -
  MUO47_RS05550 (MUO47_05535) agrA 1099730..1100446 (+) 717 WP_000688498.1 LytTR family DNA-binding domain-containing protein Regulator
  MUO47_RS05555 (MUO47_05540) - 1100518..1100627 (+) 110 Protein_1068 hypothetical protein -
  MUO47_RS05560 (MUO47_05545) - 1100815..1101774 (-) 960 WP_001253302.1 carbohydrate kinase -
  MUO47_RS05565 (MUO47_05550) - 1101771..1103255 (-) 1485 WP_000141426.1 sucrose-6-phosphate hydrolase -
  MUO47_RS05570 (MUO47_05555) - 1103404..1104354 (-) 951 WP_024273570.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27933.91 Da        Isoelectric Point: 6.0927

>NTDB_id=673993 MUO47_RS05550 WP_000688498.1 1099730..1100446(+) (agrA) [Staphylococcus aureus strain 1824]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSRDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=673993 MUO47_RS05550 WP_000688498.1 1099730..1100446(+) (agrA) [Staphylococcus aureus strain 1824]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAGAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCGCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2VG52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996