Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BTUAT1_RS10935 Genome accession   NZ_AP014928
Coordinates   2173352..2174155 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain TUAT1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2168352..2179155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTUAT1_RS10920 (BTUAT1_21620) - 2170568..2170804 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  BTUAT1_RS10925 (BTUAT1_21630) - 2170838..2171575 (-) 738 WP_035390781.1 glycerophosphodiester phosphodiesterase -
  BTUAT1_RS10930 (BTUAT1_21640) - 2171802..2172902 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  BTUAT1_RS10935 (BTUAT1_21650) spo0A 2173352..2174155 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  BTUAT1_RS10940 (BTUAT1_21660) spoIVB 2174439..2175716 (-) 1278 WP_060832426.1 SpoIVB peptidase -
  BTUAT1_RS10945 (BTUAT1_21670) recN 2175915..2177648 (-) 1734 WP_035390783.1 DNA repair protein RecN Machinery gene
  BTUAT1_RS10950 (BTUAT1_21680) ahrC 2177683..2178132 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  BTUAT1_RS10955 (BTUAT1_21690) - 2178294..2179148 (-) 855 WP_007501164.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=67388 BTUAT1_RS10935 WP_008342226.1 2173352..2174155(-) (spo0A) [Bacillus altitudinis strain TUAT1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=67388 BTUAT1_RS10935 WP_008342226.1 2173352..2174155(-) (spo0A) [Bacillus altitudinis strain TUAT1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTACTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTTGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment