Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   BTUAT1_RS10010 Genome accession   NZ_AP014928
Coordinates   2001468..2002103 (+) Length   211 a.a.
NCBI ID   WP_017359733.1    Uniprot ID   A0A653S7S4
Organism   Bacillus altitudinis strain TUAT1     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1996468..2007103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTUAT1_RS09970 (BTUAT1_19680) - 1996630..1997748 (+) 1119 WP_025207530.1 NADH-dependent flavin oxidoreductase -
  BTUAT1_RS09975 (BTUAT1_19690) - 1997800..1998306 (-) 507 WP_008344623.1 PTS glucose transporter subunit IIA -
  BTUAT1_RS09980 (BTUAT1_19700) - 1998475..1998894 (+) 420 WP_017359728.1 Hsp20/alpha crystallin family protein -
  BTUAT1_RS09985 (BTUAT1_19710) - 1998916..1999368 (-) 453 WP_017359729.1 YppG family protein -
  BTUAT1_RS09990 (BTUAT1_19720) - 1999477..1999857 (-) 381 WP_225310452.1 YppE family protein -
  BTUAT1_RS09995 (BTUAT1_19730) - 1999907..2000140 (-) 234 WP_231131595.1 DUF5446 family protein -
  BTUAT1_RS10000 sspM 2000337..2000441 (+) 105 WP_017359731.1 acid-soluble spore protein SspM -
  BTUAT1_RS10005 (BTUAT1_19740) - 2000465..2001421 (-) 957 WP_017359732.1 DUF2515 domain-containing protein -
  BTUAT1_RS10010 (BTUAT1_19750) recU 2001468..2002103 (+) 636 WP_017359733.1 Holliday junction resolvase RecU Machinery gene
  BTUAT1_RS10015 (BTUAT1_19760) - 2002123..2004810 (+) 2688 WP_060832410.1 PBP1A family penicillin-binding protein -
  BTUAT1_RS10020 (BTUAT1_19770) - 2004846..2005355 (-) 510 WP_019744018.1 YpoC family protein -
  BTUAT1_RS10025 (BTUAT1_19780) nth 2005352..2006014 (-) 663 WP_008344602.1 endonuclease III -
  BTUAT1_RS10030 (BTUAT1_19790) - 2006032..2006736 (-) 705 WP_007500879.1 DnaD domain-containing protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 24314.60 Da        Isoelectric Point: 9.6582

>NTDB_id=67387 BTUAT1_RS10010 WP_017359733.1 2001468..2002103(+) (recU) [Bacillus altitudinis strain TUAT1]
MIRYPNGKSYQPIQQIGTKKRISGESSYSNRGMTLEADLNETNQYYLVNGIAVIHKKPTPVQIVNVDYPKRSAAVIKEAY
FKQSSTTDYNGVYKGRYIDFEAKETKSTTSFPLKNFHDHQIEHMKQVEKQGGICFVIISAFGSVYYLSATDLFFFWERQQ
QNGRKSISKDELMEAGHLMTLGYSPRIDYIKVVETLHFSDDSKQHLRSKKV

Nucleotide


Download         Length: 636 bp        

>NTDB_id=67387 BTUAT1_RS10010 WP_017359733.1 2001468..2002103(+) (recU) [Bacillus altitudinis strain TUAT1]
ATGATTCGGTATCCTAACGGAAAATCGTATCAGCCCATTCAACAAATTGGGACAAAAAAAAGAATCAGCGGCGAATCATC
TTATAGTAACCGCGGGATGACGCTTGAAGCTGACTTAAATGAAACGAACCAGTACTATTTGGTCAACGGGATTGCAGTCA
TTCATAAAAAGCCTACCCCTGTTCAAATTGTCAATGTGGATTATCCAAAAAGAAGCGCTGCTGTCATTAAAGAAGCCTAT
TTTAAACAATCCTCCACAACAGACTACAACGGGGTATACAAAGGGCGTTATATCGATTTTGAAGCAAAGGAAACCAAAAG
CACCACCTCGTTTCCACTCAAAAATTTCCACGACCATCAAATTGAGCATATGAAACAGGTTGAAAAGCAAGGCGGTATTT
GTTTTGTTATTATATCCGCATTTGGTTCCGTTTATTATTTGTCCGCTACTGACCTCTTCTTCTTTTGGGAGCGGCAGCAG
CAAAACGGCCGTAAATCCATTAGCAAAGATGAATTAATGGAAGCAGGTCACCTCATGACACTTGGATATTCGCCAAGAAT
TGATTATATTAAAGTAGTGGAGACACTTCATTTTTCGGATGACAGCAAGCAACATTTACGTTCGAAAAAGGTTTAA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(31-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653S7S4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

72.772

95.735

0.697

Multiple sequence alignment