Detailed information NTG0067382

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R29_RS20995
• Genome accession: NZ_AP022295
• Coordinates: 4415074..4416099 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain BEC1-S17-ESBL-07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4410074..4421099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R29_RS20985 (BE1S17E07_40670)	rpmE	4412305..4412517 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R29_RS20990 (BE1S17E07_40680)	priA	4412720..4414918 (+)	2199	WP_001350069.1	primosomal protein N'	Machinery gene
H7R29_RS20995 (BE1S17E07_40690)	cytR	4415074..4416099 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R29_RS21000 (BE1S17E07_40700)	ftsN	4416191..4417150 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R29_RS21005 (BE1S17E07_40710)	hslV	4417243..4417773 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R29_RS21010 (BE1S17E07_40720)	hslU	4417783..4419114 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
H7R29_RS21015 (BE1S17E07_40730)	menA	4419181..4420107 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R29_RS21020 (BE1S17E07_40740)	rraA	4420200..4420685 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R29_RS21025 (BE1S17E07_40750)	zapB	4420770..4421015 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=67382 H7R29_RS20995 WP_000644904.1 4415074..4416099(+) (cytR) [Escherichia coli strain BEC1-S17-ESBL-07]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67382 H7R29_RS20995 WP_000644904.1 4415074..4416099(+) (cytR) [Escherichia coli strain BEC1-S17-ESBL-07]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628