Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   BTUAT1_RS05175 Genome accession   NZ_AP014928
Coordinates   1038253..1038831 (+) Length   192 a.a.
NCBI ID   WP_046526639.1    Uniprot ID   A0A9X0FWV9
Organism   Bacillus altitudinis strain TUAT1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1033253..1043831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTUAT1_RS05155 (BTUAT1_09820) - 1033746..1035107 (-) 1362 WP_370539267.1 globin-coupled sensor protein -
  BTUAT1_RS05160 (BTUAT1_09830) - 1035133..1036665 (-) 1533 WP_025207048.1 FAD-dependent oxidoreductase -
  BTUAT1_RS05165 (BTUAT1_09840) - 1036808..1037668 (+) 861 WP_017366957.1 SDR family oxidoreductase -
  BTUAT1_RS05170 (BTUAT1_09850) - 1037727..1037963 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  BTUAT1_RS05175 (BTUAT1_09860) comK 1038253..1038831 (+) 579 WP_046526639.1 competence protein ComK Regulator
  BTUAT1_RS05180 (BTUAT1_09870) - 1038975..1040081 (+) 1107 WP_025207097.1 alanine racemase -
  BTUAT1_RS05185 (BTUAT1_09880) - 1040383..1040865 (+) 483 WP_025207098.1 hypothetical protein -
  BTUAT1_RS05190 (BTUAT1_09890) - 1040896..1042335 (-) 1440 WP_025207099.1 PLP-dependent aminotransferase family protein -
  BTUAT1_RS05195 (BTUAT1_09900) - 1042479..1043648 (+) 1170 WP_048001723.1 MFS transporter -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22376.41 Da        Isoelectric Point: 8.8031

>NTDB_id=67367 BTUAT1_RS05175 WP_046526639.1 1038253..1038831(+) (comK) [Bacillus altitudinis strain TUAT1]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSRVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=67367 BTUAT1_RS05175 WP_046526639.1 1038253..1038831(+) (comK) [Bacillus altitudinis strain TUAT1]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGTGTATATTCAAGAGTGATCGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAATCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains


Predicted by InterproScan.

(10-158)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

60.938

100

0.609


Multiple sequence alignment