Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   OH775_RS40995 Genome accession   NZ_CP109301
Coordinates   9097459..9097872 (+) Length   137 a.a.
NCBI ID   WP_406479628.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01615     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 9092459..9102872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH775_RS40985 (OH775_40910) - 9093183..9096956 (-) 3774 WP_406479624.1 HAMP domain-containing protein -
  OH775_RS40990 - 9097355..9097498 (+) 144 WP_406479626.1 hypothetical protein -
  OH775_RS40995 stkP/pknB 9097459..9097872 (+) 414 WP_406479628.1 serine/threonine-protein kinase Regulator
  OH775_RS41000 - 9097941..9098657 (-) 717 WP_406479630.1 CocE/NonD family hydrolase -
  OH775_RS41005 (OH775_40925) - 9098638..9098895 (-) 258 WP_406479631.1 hypothetical protein -
  OH775_RS41010 (OH775_40930) - 9099041..9100249 (+) 1209 WP_406483381.1 Ig-like domain-containing protein -
  OH775_RS41015 (OH775_40935) - 9100333..9100611 (-) 279 WP_327427490.1 hypothetical protein -
  OH775_RS41020 (OH775_40940) - 9100804..9101895 (+) 1092 WP_406479633.1 integrase core domain-containing protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 14468.68 Da        Isoelectric Point: 6.7154

>NTDB_id=673580 OH775_RS40995 WP_406479628.1 9097459..9097872(+) (stkP/pknB) [Streptomyces sp. NBC_01615]
MAAALAAAHRQGVIHRDIKPVSVMLTAERTVKITDFGIARFTDDASNTLTATGKVLGTSAYLAPERALGRPAQPASDIYS
LGCMLDGLLTDRPPPLGETTFAVVQQQVSAVPDPPTQLRPDIPGPLAAYILHLLAKD

Nucleotide


Download         Length: 414 bp        

>NTDB_id=673580 OH775_RS40995 WP_406479628.1 9097459..9097872(+) (stkP/pknB) [Streptomyces sp. NBC_01615]
ATGGCGGCGGCCCTGGCCGCTGCGCACCGCCAGGGCGTGATCCACCGGGACATCAAACCCGTCAGCGTAATGCTCACCGC
CGAACGCACCGTGAAGATCACCGACTTCGGGATCGCCCGCTTCACCGACGACGCCTCCAACACCCTCACCGCGACCGGCA
AGGTCCTGGGGACCAGCGCCTACCTGGCACCGGAACGCGCCCTGGGACGCCCCGCCCAGCCCGCCTCCGACATCTACTCC
CTCGGCTGCATGCTGGACGGATTGCTCACTGACCGGCCACCGCCCCTCGGCGAGACCACCTTCGCCGTGGTCCAGCAACA
GGTCAGCGCCGTACCCGACCCGCCCACACAGCTCCGCCCGGACATACCAGGACCGCTGGCCGCCTACATCCTGCATCTAT
TGGCCAAGGACTGA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(2-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

38.519

98.54

0.38