Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   OH775_RS35010 Genome accession   NZ_CP109301
Coordinates   7726346..7728325 (-) Length   659 a.a.
NCBI ID   WP_406478038.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01615     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 7721346..7733325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH775_RS34995 (OH775_34935) - 7721355..7722620 (+) 1266 WP_327428529.1 FAD-dependent oxidoreductase -
  OH775_RS35000 (OH775_34940) dnaG 7722667..7724568 (+) 1902 WP_327428528.1 DNA primase -
  OH775_RS35005 (OH775_34945) - 7724751..7726115 (+) 1365 WP_327428527.1 RNA polymerase sigma factor -
  OH775_RS35010 (OH775_34950) rcrQ 7726346..7728325 (-) 1980 WP_406478038.1 ABC transporter ATP-binding protein Regulator
  OH775_RS35015 (OH775_34955) rcrP 7728325..7730058 (-) 1734 WP_406478040.1 ABC transporter ATP-binding protein Regulator
  OH775_RS35020 (OH775_34960) - 7730258..7731712 (-) 1455 WP_406478042.1 FGGY family carbohydrate kinase -
  OH775_RS35025 (OH775_34965) - 7731853..7732158 (-) 306 WP_406478044.1 YtxH domain-containing protein -
  OH775_RS35045 - 7732950..7733066 (-) 117 Protein_6934 MOSC domain-containing protein -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 70882.65 Da        Isoelectric Point: 6.6036

>NTDB_id=673571 OH775_RS35010 WP_406478038.1 7726346..7728325(-) (rcrQ) [Streptomyces sp. NBC_01615]
MAGPMGRMMAGGGPDQHSMDFKGSGKRLLSQFKPERLTMYGMLCAVVLSVALSVIGPKILGKATDLVFAGIIGRQMPSGS
TKAEVLASMRERGEGGMADMLSGTDFTPGKGIDFAAVGNVLLLALCTFLLAGLLMAVATRLVNRAVNKTVYRMREDLQAK
LSRLPLSYFDKRQRGEVLSRATNDIDNIQQTLQQSMGQLVNSLLTIVGVLVMMFWVSPLLALVALVTVPLSFFVATRVGK
RSQPHFVQQWRTTGKLNAHIEEMYTGHNLVKVFGRQDESAAQFAEQNEKLYEAGFKAQFNSGVMQPLMMFVSNLNYVLVA
VVGGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQEADPVPAARPDELRGRVALQ
NVSFRYDPEKPLIEDLSLKVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIASMSRDELRAGIGMVLQDT
WLFGGTIAENIAYGAGVEGVARSASGKGGGGRRVGVTRGEIEEAARAAHADRFVRTLPEGYDTVIDDEGTGVSAGEKQLI
TIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMAKLAHGRTSFVIAHRLSTIRDADTILVMENGSIVEQGAHTELLAAG
GAYARLYQAQFAQAVAEVD

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=673571 OH775_RS35010 WP_406478038.1 7726346..7728325(-) (rcrQ) [Streptomyces sp. NBC_01615]
ATGGCCGGGCCCATGGGACGCATGATGGCCGGGGGCGGCCCCGATCAGCACTCGATGGATTTCAAGGGGTCCGGCAAACG
GCTCCTCTCCCAGTTCAAGCCCGAGCGCCTCACCATGTACGGCATGCTGTGCGCCGTCGTCCTGAGCGTGGCGCTCTCGG
TGATCGGGCCGAAGATCCTCGGCAAGGCCACCGACCTGGTCTTCGCCGGAATCATCGGACGGCAGATGCCGTCCGGCAGC
ACCAAGGCCGAGGTCCTCGCGTCCATGCGCGAGCGCGGCGAGGGCGGCATGGCCGACATGCTCTCGGGGACGGACTTCAC
CCCGGGCAAGGGCATCGACTTCGCCGCCGTCGGAAACGTACTGCTGCTCGCGCTCTGTACGTTCCTGCTGGCCGGCCTGC
TGATGGCGGTGGCGACGCGGCTGGTGAACCGGGCCGTCAACAAGACCGTGTACCGCATGCGCGAGGACCTCCAGGCGAAG
CTCTCCCGGCTGCCCCTGTCGTACTTCGACAAGCGGCAGCGCGGTGAGGTGCTCAGCCGCGCGACGAACGACATCGACAA
CATCCAGCAGACGCTGCAACAGTCGATGGGCCAGCTGGTCAACTCGCTGCTGACCATCGTGGGTGTGCTGGTGATGATGT
TCTGGGTCTCGCCGCTGCTCGCGCTGGTCGCGCTGGTCACCGTGCCTTTGTCCTTCTTCGTCGCCACACGCGTCGGCAAG
CGCTCGCAGCCGCACTTCGTGCAGCAGTGGCGCACCACCGGCAAGCTCAACGCGCACATCGAGGAGATGTACACCGGGCA
CAACCTGGTGAAGGTGTTCGGGCGCCAGGACGAGTCGGCGGCGCAGTTCGCCGAGCAGAACGAGAAGTTGTACGAGGCCG
GGTTCAAGGCGCAGTTCAACAGCGGGGTCATGCAGCCGCTGATGATGTTCGTGTCGAACCTGAACTATGTGCTGGTGGCG
GTGGTCGGCGGACTGCGTGTCGCGTCCGGCTCGCTGTCCATCGGTGACGTCCAGGCCTTCATCCAGTACTCCCGGCAGTT
CTCGATGCCGCTGACGCAGGTGGCGTCGATGGCGAATCTGGTGCAGTCGGGTGTCGCGTCGGCGGAGCGGATCTTCGAGC
TGCTGGACGCGGAGGAGCAGGAGGCCGACCCGGTGCCGGCGGCCCGTCCCGACGAGCTGCGCGGGCGGGTGGCCCTGCAG
AACGTGTCGTTCCGGTACGACCCCGAGAAGCCGCTCATCGAGGATCTGTCGCTGAAGGTGGAGCCCGGGCACACGGTGGC
GATCGTCGGCCCGACAGGTGCCGGCAAGACGACGCTGGTGAACCTGCTGATGCGGTTCTACGAAGTCACCGGGGGGCGCA
TCACCCTCGACGGTGTCGACATCGCGTCCATGTCCCGGGACGAACTCCGGGCCGGTATCGGCATGGTGCTCCAGGACACC
TGGCTGTTCGGGGGGACGATCGCCGAGAACATCGCGTACGGGGCTGGAGTAGAAGGGGTGGCGCGAAGCGCCTCCGGCAA
GGGCGGTGGTGGGCGACGGGTGGGCGTCACGCGGGGGGAGATCGAGGAGGCGGCGCGGGCCGCGCACGCGGATCGGTTCG
TCCGGACGCTGCCGGAGGGCTACGACACCGTGATCGACGACGAGGGGACGGGGGTCAGTGCGGGTGAGAAGCAGCTGATC
ACGATTGCCCGGGCGTTCCTGTCCGATCCGGTGATTCTGGTGCTGGACGAGGCGACGAGTTCCGTGGACACCCGTACGGA
GGTTCTGATCCAGAAGGCGATGGCGAAGCTCGCGCATGGGCGGACCTCGTTTGTGATCGCGCATCGGTTGTCGACGATTC
GGGATGCCGACACGATTCTGGTGATGGAGAACGGATCGATCGTGGAGCAGGGCGCGCACACGGAGCTGCTGGCCGCGGGC
GGGGCGTACGCGCGCCTGTACCAGGCCCAGTTCGCCCAGGCGGTGGCTGAGGTCGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(49-351)

ABC transporter (ABC_tran)

(414-580)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.528

96.358

0.381