Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OH775_RS22935 Genome accession   NZ_CP109301
Coordinates   5039479..5040603 (+) Length   374 a.a.
NCBI ID   WP_406474895.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01615     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5034479..5045603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH775_RS22920 (OH775_22870) - 5035057..5035917 (+) 861 WP_327430651.1 hypothetical protein -
  OH775_RS22925 (OH775_22875) - 5036038..5037804 (-) 1767 WP_406474892.1 BACON domain-containing protein -
  OH775_RS22930 (OH775_22880) radA/sms 5038001..5039410 (+) 1410 WP_327430649.1 DNA repair protein RadA Machinery gene
  OH775_RS22935 (OH775_22885) disA 5039479..5040603 (+) 1125 WP_406474895.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OH775_RS22940 (OH775_22890) - 5040804..5041613 (-) 810 WP_406474897.1 hypothetical protein -
  OH775_RS22945 (OH775_22895) - 5042038..5042946 (+) 909 WP_406474899.1 A/G-specific adenine glycosylase -
  OH775_RS22950 (OH775_22900) - 5043244..5043795 (+) 552 WP_327430645.1 SigE family RNA polymerase sigma factor -
  OH775_RS22955 (OH775_22905) - 5043783..5044430 (+) 648 WP_327430644.1 hypothetical protein -
  OH775_RS22960 (OH775_22910) cseB 5044450..5045157 (+) 708 WP_327430643.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40182.92 Da        Isoelectric Point: 4.8595

>NTDB_id=673545 OH775_RS22935 WP_406474895.1 5039479..5040603(+) (disA) [Streptomyces sp. NBC_01615]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=673545 OH775_RS22935 WP_406474895.1 5039479..5040603(+) (disA) [Streptomyces sp. NBC_01615]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACAGCCCTGCGCGACGGGCTCGAGCGGATTCTCCGTGGCAACACGGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATTCTGCGGGCGGGCGTGCAGCTCGTGCC
CGACCCGACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTCTCCAAGCAGGTCGACTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTCACCGTCCGCGACGTGTCGGCTGTCGCCCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTAGTCGAACTGGGCACCGACGGGCGTCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGGGTCGAGCCCGAGCGCGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCTCTCTCCGAACTGGACGCGCTCAGCCACGCGGAGCTCCTCGAACTCTCCACCGTGGCACGGGCGCTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCAGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTCCCCGGCGCG
ATCATCGACCGCCTTGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTGCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGTGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAACGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436