Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MT488_RS07790 Genome accession   NZ_CP094841
Coordinates   1651860..1652486 (+) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain Sb-9     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1646860..1657486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MT488_RS07770 (MT488_07770) - 1647254..1649014 (-) 1761 WP_063215663.1 Lon protease family protein -
  MT488_RS07775 (MT488_07775) matP 1649201..1649653 (+) 453 WP_244047856.1 macrodomain Ter protein MatP -
  MT488_RS07780 (MT488_07780) ompA 1649723..1650778 (-) 1056 WP_020884794.1 porin OmpA -
  MT488_RS07785 (MT488_07785) sulA 1651133..1651642 (-) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  MT488_RS07790 (MT488_07790) sxy/tfoX 1651860..1652486 (+) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  MT488_RS07795 (MT488_07795) yccS 1652443..1654605 (-) 2163 WP_020884791.1 YccS family putative transporter -
  MT488_RS07800 (MT488_07800) - 1654625..1655071 (-) 447 WP_025204535.1 YccF domain-containing protein -
  MT488_RS07805 (MT488_07805) helD 1655194..1657248 (+) 2055 WP_047357173.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=673525 MT488_RS07790 WP_020884792.1 1651860..1652486(+) (sxy/tfoX) [Enterobacter ludwigii strain Sb-9]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=673525 MT488_RS07790 WP_020884792.1 1651860..1652486(+) (sxy/tfoX) [Enterobacter ludwigii strain Sb-9]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGATGGGGAACTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCGTCATTCTTAACCCTGATGAAACGGGGTCGTCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGACTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTAAAGATGCGGGCGAAAAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577