Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OH775_RS14550 Genome accession   NZ_CP109301
Coordinates   3169337..3170113 (+) Length   258 a.a.
NCBI ID   WP_189188217.1    Uniprot ID   A0A918D5P5
Organism   Streptomyces sp. NBC_01615     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3164337..3175113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH775_RS14535 - 3164823..3165014 (-) 192 Protein_2899 DUF6215 domain-containing protein -
  OH775_RS14540 (OH775_14520) - 3165209..3168112 (-) 2904 WP_406472758.1 vitamin B12-dependent ribonucleotide reductase -
  OH775_RS14545 (OH775_14525) nrdR 3168263..3168817 (-) 555 WP_327432205.1 transcriptional regulator NrdR -
  OH775_RS14550 (OH775_14530) dinR/lexA 3169337..3170113 (+) 777 WP_189188217.1 transcriptional repressor LexA Regulator
  OH775_RS14555 (OH775_14535) - 3170747..3172723 (-) 1977 WP_406472761.1 ATP-dependent DNA helicase -
  OH775_RS14560 (OH775_14540) - 3172818..3174821 (-) 2004 WP_406472763.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27977.71 Da        Isoelectric Point: 7.4755

>NTDB_id=673520 OH775_RS14550 WP_189188217.1 3169337..3170113(+) (dinR/lexA) [Streptomyces sp. NBC_01615]
MTTTADSATITAQDRSQGRLEPVHAMNEAVNHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=673520 OH775_RS14550 WP_189188217.1 3169337..3170113(+) (dinR/lexA) [Streptomyces sp. NBC_01615]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCGTGAATCATGAGGGACCCAAGCGCTCCCTGCCAGGCCGACCTCCAGGCATCCGCGCGGACAGCTCGGGGCTCA
CAGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCGGTCGGCCTGTCCAGCACCTCCTCGGTCGCGCATCAGCTGATGGCATTGGAGCGCAAGGGCTTTCTACGCCG
CGACCCGCACCGCCCGCGTGCGTACGAGGTCCGGGGCTCCGACCAGTCCTCGGTCCAGCCCACCGACACGGCAGGCAAGC
CGGCCGCGTCGTATGTGCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTCGAGGACGTC
TTCCCCCTCCCCCGCCAGCTGGTCGGTGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCGATGCTGGACG
GCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGGCACGTGTGGCTGCTGCCGCACAACTCCGCCTACCAGCCGATT
CCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTGGCAGTACTGCGGCGGGTGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A918D5P5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372