Detailed information NTG0673461

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: MUA60_RS15210
• Genome accession: NZ_CP094824
• Coordinates: 2878104..2879453 (+)
• Length: 449 a.a.
• NCBI ID: WP_262648989.1
• Uniprot ID: -
• Organism: Mammaliicoccus sciuri strain IVB6216
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2880222..2880896	2878104..2879453	flank	769

Gene organization within MGE regions

Location: 2878104..2880896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA60_RS15210 (MUA60_15170)	ccrA	2878104..2879453 (+)	1350	WP_262648989.1	cassette chromosome recombinase CcrA	Machinery gene
MUA60_RS15215 (MUA60_15175)	-	2879475..2880188 (+)	714	Protein_2977	recombinase family protein	-
MUA60_RS15220 (MUA60_15180)	-	2880222..2880896 (+)	675	WP_262648940.1	IS6-like element IS257 family transposase	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52178.86 Da
• Isoelectric Point: 10.0669

>NTDB_id=673461 MUA60_RS15210 WP_262648989.1 2878104..2879453(+) (ccrA) [Mammaliicoccus sciuri strain IVB6216]
MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITELIQQGQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSIHDGYFDMDKAFDRLKLNVFISLAELESDNIGEQVKNGLKEKVRQGKLITTHAPFGYTYR
NGTFTINQDEAPTVKTIFHYYLQGYGYKKIAQYLDTDDKCINRKPYQVRAIITNPNYCGRVINQYGQYDNMFPSIVSTNI
YEQAQEIRSQKHTKRTPSDNQLQKKIKCPYCGSTLTNMTIRKKHHTLRYYVCPKNMNASRFVCAFKGINAQVLETSVLAT
CQNFFQNQQLYSKINQTIQQRFKRQRDIEAKHTLTQEQLIDKLAKGMIDAETFRNQSQSVLQKRKTISSISDTQLQTSLQ
KVIQKSFTLNMLYPYIDVIHITKNKELSGIYIKNEPLNIVNQTIQSSTG

Nucleotide

• Length: 1350 bp

>NTDB_id=673461 MUA60_RS15210 WP_262648989.1 2878104..2879453(+) (ccrA) [Mammaliicoccus sciuri strain IVB6216]
ATGAAACAAGCAATAGGTTACTTACGACAGAGCACTACAAAGCAACAATCCTTAGCAGCACAAAAACAAACCATCGAGGC
ATTAGCCAAAAAACATAATATTCAATACATTACCTTTTATAGCGATAAGCAATCAGGACGCACTGATAAGCGGAACGGTT
ACCAACAAATTACTGAACTGATTCAACAAGGACAATGTGATGTATTATGTTGTTATCGCTTGAATCGACTGCATCGTAAT
TTGAAAAATGCATTAAAACTTATGAAACTGTGTCAAAAGTATCATGTTCATATTCTAAGTATTCATGATGGCTATTTTGA
TATGGATAAAGCGTTTGATCGCCTAAAACTTAATGTATTCATAAGTCTCGCAGAATTAGAGTCCGATAATATTGGTGAAC
AAGTCAAGAATGGTCTTAAAGAAAAAGTTAGACAAGGTAAACTCATCACGACACATGCACCATTTGGTTATACCTATCGC
AATGGCACATTCACAATTAATCAAGATGAAGCACCAACGGTTAAGACAATATTCCATTACTACCTACAAGGCTATGGTTA
TAAGAAAATTGCGCAATACCTAGACACAGATGATAAATGTATTAATCGTAAGCCCTACCAAGTACGCGCTATTATCACGA
ATCCTAATTATTGTGGTCGCGTTATCAATCAATATGGACAATATGATAACATGTTCCCATCTATTGTTTCGACCAATATA
TACGAACAAGCTCAAGAAATACGGTCACAAAAACATACAAAACGGACTCCCTCAGATAATCAACTTCAGAAGAAAATAAA
ATGTCCATATTGTGGATCAACCCTGACTAATATGACAATTAGAAAAAAGCACCATACCTTACGTTATTATGTCTGTCCTA
AAAACATGAATGCATCACGTTTTGTCTGTGCATTCAAAGGAATCAATGCGCAAGTATTAGAAACAAGTGTCTTAGCGACT
TGTCAGAACTTCTTTCAGAACCAACAGCTCTATTCAAAAATCAACCAAACAATTCAACAACGATTCAAAAGACAAAGGGA
CATAGAAGCTAAACATACACTCACGCAAGAACAACTGATAGATAAACTTGCCAAAGGTATGATTGATGCTGAAACATTCA
GGAATCAGTCTCAATCAGTGCTTCAAAAGCGCAAAACCATATCTTCAATAAGTGATACTCAGTTACAAACATCACTACAA
AAGGTTATACAGAAAAGTTTCACGTTAAACATGTTATATCCCTATATTGATGTCATTCATATTACTAAAAATAAAGAATT
AAGCGGAATCTATATAAAAAATGAGCCACTAAACATCGTTAATCAAACGATACAATCATCAACTGGCTAA

Domains

Predicted by InterproScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

• Recombinase (Recombinase) (169-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	82.998	99.555	0.826
ccrA	Staphylococcus aureus N315	73.942	100	0.739