Detailed information NTG0673362

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: MUA49_RS13185
• Genome accession: NZ_CP094821
• Coordinates: 2627013..2628383 (-)
• Length: 456 a.a.
• NCBI ID: WP_262642124.1
• Uniprot ID: -
• Organism: Mammaliicoccus sciuri strain IVB6224
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2622013..2633383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA49_RS13160 (MUA49_13155)	cysE	2622406..2623047 (-)	642	WP_025904850.1	serine O-acetyltransferase	-
MUA49_RS13165 (MUA49_13160)	gltX	2623302..2624756 (-)	1455	WP_262642122.1	glutamate--tRNA ligase	-
MUA49_RS13170 (MUA49_13165)	ispF	2624772..2625251 (-)	480	WP_103360793.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
MUA49_RS13175 (MUA49_13170)	ispD	2625244..2625930 (-)	687	WP_262642123.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
MUA49_RS13180 (MUA49_13175)	-	2625932..2626990 (-)	1059	WP_037589912.1	PIN/TRAM domain-containing protein	-
MUA49_RS13185 (MUA49_13180)	radA	2627013..2628383 (-)	1371	WP_262642124.1	DNA repair protein RadA	Machinery gene
MUA49_RS13190 (MUA49_13185)	-	2628539..2631001 (-)	2463	WP_262642125.1	ATP-dependent Clp protease ATP-binding subunit	-
MUA49_RS13195 (MUA49_13190)	-	2631018..2632025 (-)	1008	WP_025904843.1	protein arginine kinase	-
MUA49_RS13200 (MUA49_13195)	-	2632026..2632562 (-)	537	WP_025904842.1	UvrB/UvrC motif-containing protein	-
MUA49_RS13205 (MUA49_13200)	-	2632577..2633038 (-)	462	WP_025904841.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50467.20 Da
• Isoelectric Point: 7.7103

>NTDB_id=673362 MUA49_RS13185 WP_262642124.1 2627013..2628383(-) (radA) [Mammaliicoccus sciuri strain IVB6224]
MAKKKVIFECLACGYQSPKWMGKCPNCGAWNQMEESIEHKETKGPKNTFKSDVPAQKIEKLKDVKEEDTPRIKTKINEFN
RVLGGGVVEGSLVLIGGDPGIGKSTLLLQICAALSQQKNVLYVSGEESVRQTKLRAERLVEDSGELNVYAETNLEIIHSM
VQKEKPDVLVIDSIQTVFHPEVTSAPGSVSQVRECTQNLMHIAKQMNIATFIVGHVTKDGQIAGPRLLEHMVDTVLYFEG
DTHHAYRILRAVKNRFGSTNEMGIFEMKQTGLNEVKNPSEMFLEERTKHVSGSTIVATMEGTRSILVEVQALVTPTTFHN
PRRMATGIDHNRLSLLMAVLEKKENFLLQQQDAYIKIAGGVKLSEPAVDLSIVIAIASSFQDKPTKGDDCFVGEVGLTGE
VRRVARIDQRVQEAAKLGFKRIIIPKNNIKGLEFPEGTEVIGVSTTREALKIAFNA

Nucleotide

• Length: 1371 bp

>NTDB_id=673362 MUA49_RS13185 WP_262642124.1 2627013..2628383(-) (radA) [Mammaliicoccus sciuri strain IVB6224]
ATGGCCAAAAAGAAAGTAATATTTGAGTGTTTAGCCTGCGGATATCAATCTCCAAAATGGATGGGGAAATGCCCTAATTG
TGGTGCATGGAACCAAATGGAAGAATCAATAGAACATAAAGAAACTAAAGGTCCTAAAAATACATTCAAGTCAGATGTAC
CCGCACAAAAAATAGAAAAATTAAAAGACGTTAAAGAAGAAGATACACCTAGAATTAAGACTAAAATCAATGAATTTAAT
CGCGTATTAGGTGGCGGTGTTGTAGAAGGTTCGCTTGTACTCATTGGTGGTGACCCTGGTATTGGTAAATCCACATTATT
ATTACAAATTTGTGCGGCTTTATCTCAACAAAAAAATGTCTTATATGTTTCAGGTGAAGAATCTGTAAGACAAACAAAAT
TAAGAGCTGAAAGATTAGTTGAAGATTCAGGAGAATTAAATGTTTATGCTGAAACGAATTTAGAGATTATACATAGTATG
GTTCAAAAAGAAAAACCAGATGTATTAGTAATAGATTCCATTCAAACTGTCTTCCACCCTGAAGTCACTTCTGCGCCAGG
TTCTGTTTCTCAAGTTAGAGAATGTACACAAAATTTAATGCATATCGCAAAACAAATGAATATTGCTACATTTATTGTTG
GACACGTAACGAAAGATGGACAAATTGCTGGTCCACGTTTGTTAGAACATATGGTGGATACAGTATTATATTTTGAAGGC
GATACACATCATGCATACAGAATATTAAGAGCAGTTAAAAACCGTTTTGGTTCGACAAATGAAATGGGTATTTTTGAAAT
GAAGCAAACGGGTCTTAACGAAGTTAAAAATCCGTCTGAAATGTTCTTAGAAGAAAGAACGAAACATGTATCGGGTTCAA
CTATTGTGGCAACTATGGAAGGTACGAGATCTATTTTAGTTGAAGTACAAGCTTTAGTGACGCCAACGACTTTTCATAAT
CCACGAAGAATGGCAACAGGTATTGATCACAATAGATTAAGCTTATTGATGGCTGTATTAGAGAAGAAAGAGAATTTCTT
ATTACAACAACAAGACGCATATATCAAAATCGCCGGTGGTGTAAAATTAAGTGAACCCGCAGTAGATTTAAGTATTGTTA
TCGCGATAGCTTCAAGTTTCCAAGATAAACCTACTAAAGGTGATGATTGTTTCGTAGGTGAGGTTGGCTTAACAGGTGAA
GTAAGAAGGGTTGCTAGAATTGATCAACGTGTACAAGAAGCGGCTAAATTAGGATTTAAACGTATTATCATACCTAAAAA
TAATATTAAAGGTTTAGAATTCCCAGAAGGTACTGAAGTTATTGGCGTATCAACAACAAGAGAAGCATTGAAAATTGCTT
TTAATGCATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (349-428)

• AAA domain (AAA_25) (67-221)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	65.502	100	0.658
radA	Streptococcus pneumoniae Rx1	61.674	99.561	0.614
radA	Streptococcus pneumoniae D39	61.674	99.561	0.614
radA	Streptococcus pneumoniae R6	61.674	99.561	0.614
radA	Streptococcus pneumoniae TIGR4	61.674	99.561	0.614
radA	Streptococcus mitis NCTC 12261	61.674	99.561	0.614
radA	Streptococcus mitis SK321	61.674	99.561	0.614