Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG987_RS18125 Genome accession   NZ_CP109296
Coordinates   4049660..4050784 (+) Length   374 a.a.
NCBI ID   WP_313937906.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01620     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4044660..4055784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG987_RS18110 (OG987_18120) - 4045255..4046124 (+) 870 WP_329451629.1 hypothetical protein -
  OG987_RS18115 (OG987_18125) - 4046157..4047926 (-) 1770 WP_406338657.1 BACON domain-containing protein -
  OG987_RS18120 (OG987_18130) radA/sms 4048167..4049579 (+) 1413 WP_354392007.1 DNA repair protein RadA Machinery gene
  OG987_RS18125 (OG987_18135) disA 4049660..4050784 (+) 1125 WP_313937906.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG987_RS18130 (OG987_18140) - 4050945..4051754 (-) 810 WP_388688845.1 hypothetical protein -
  OG987_RS18135 (OG987_18145) - 4052606..4053508 (+) 903 WP_313937908.1 A/G-specific adenine glycosylase -
  OG987_RS18140 (OG987_18150) - 4053684..4054334 (+) 651 WP_354392004.1 SigE family RNA polymerase sigma factor -
  OG987_RS18145 (OG987_18155) - 4054322..4055011 (+) 690 WP_382579522.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40361.28 Da        Isoelectric Point: 4.8644

>NTDB_id=673301 OG987_RS18125 WP_313937906.1 4049660..4050784(+) (disA) [Streptomyces sp. NBC_01620]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=673301 OG987_RS18125 WP_313937906.1 4049660..4050784(+) (disA) [Streptomyces sp. NBC_01620]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGTGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTCTACGTGGACGGGGAGCGCCGGGTGCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATACGTGGTGGAGCTGGGCACCGACGGGCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAACTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAGCTGCTCGAACTTCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GATCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCAGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436