Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MUA23_RS11525 Genome accession   NZ_CP094816
Coordinates   2282910..2283881 (-) Length   323 a.a.
NCBI ID   WP_025905417.1    Uniprot ID   A0AAJ4SJJ8
Organism   Mammaliicoccus sciuri strain IVB6231     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 2284573..2310475 2282910..2283881 flank 692


Gene organization within MGE regions


Location: 2282910..2310475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA23_RS11525 (MUA23_11500) ceuB 2282910..2283881 (-) 972 WP_025905417.1 ABC transporter permease Machinery gene
  MUA23_RS11530 (MUA23_11505) - 2284007..2284423 (-) 417 WP_048539936.1 FixH family protein -
  MUA23_RS11535 (MUA23_11510) nrdF 2284573..2285544 (-) 972 WP_048539937.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  MUA23_RS11540 (MUA23_11515) nrdE 2285573..2287678 (-) 2106 WP_106417915.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  MUA23_RS11545 (MUA23_11520) nrdI 2287641..2288039 (-) 399 WP_025905413.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  MUA23_RS11550 (MUA23_11525) - 2288414..2289298 (+) 885 WP_106417838.1 DMT family transporter -
  MUA23_RS11555 (MUA23_11530) queF 2289298..2289798 (+) 501 WP_106417837.1 preQ(1) synthase -
  MUA23_RS11560 (MUA23_11535) - 2290093..2291607 (+) 1515 WP_048539941.1 peptide MFS transporter -
  MUA23_RS11565 (MUA23_11540) - 2292196..2293698 (+) 1503 WP_048539942.1 peptide MFS transporter -
  MUA23_RS11570 (MUA23_11545) - 2293738..2294319 (-) 582 WP_058591624.1 5'(3')-deoxyribonucleotidase -
  MUA23_RS11575 (MUA23_11550) hisC 2294384..2295451 (-) 1068 WP_058591625.1 histidinol-phosphate transaminase -
  MUA23_RS11580 (MUA23_11555) - 2295554..2297068 (-) 1515 WP_078355506.1 ABC transporter permease/substrate-binding protein -
  MUA23_RS11585 (MUA23_11560) - 2297065..2298027 (-) 963 WP_048539946.1 ABC transporter ATP-binding protein -
  MUA23_RS11590 (MUA23_11565) recQ 2298117..2299895 (-) 1779 WP_078355505.1 DNA helicase RecQ -
  MUA23_RS11595 (MUA23_11570) - 2299918..2301789 (-) 1872 WP_078355504.1 ABC-F family ATP-binding cassette domain-containing protein -
  MUA23_RS11600 (MUA23_11575) - 2301875..2302690 (+) 816 WP_058591629.1 ZIP family metal transporter -
  MUA23_RS11605 (MUA23_11580) ltaS 2303123..2305063 (-) 1941 WP_262656946.1 polyglycerol-phosphate lipoteichoic acid synthase LtaS -
  MUA23_RS11610 (MUA23_11585) - 2305264..2306268 (-) 1005 WP_078355503.1 biotin-dependent carboxyltransferase family protein -
  MUA23_RS11615 (MUA23_11590) - 2306259..2306960 (-) 702 WP_058591630.1 carboxyltransferase domain-containing protein -
  MUA23_RS11620 (MUA23_11595) - 2307001..2307213 (-) 213 WP_058591631.1 hypothetical protein -
  MUA23_RS11625 (MUA23_11600) - 2307275..2309023 (-) 1749 WP_078355502.1 chorismate-binding protein -
  MUA23_RS11630 (MUA23_11605) - 2309001..2309603 (-) 603 WP_058591633.1 aminodeoxychorismate/anthranilate synthase component II -
  MUA23_RS11635 (MUA23_11610) queC 2309807..2310475 (+) 669 WP_058591634.1 7-cyano-7-deazaguanine synthase QueC -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35476.97 Da        Isoelectric Point: 10.7243

>NTDB_id=673207 MUA23_RS11525 WP_025905417.1 2282910..2283881(-) (ceuB) [Mammaliicoccus sciuri strain IVB6231]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=673207 MUA23_RS11525 WP_025905417.1 2282910..2283881(-) (ceuB) [Mammaliicoccus sciuri strain IVB6231]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCGAGAA
CAGTCAGTATTATTATCTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCTTCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTAATCATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCACATACAGCTGTATTTGGTGCATTGTTTGTCATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.104

98.142

0.502