Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA84_RS06230 | Genome accession | NZ_CP094813 |
| Coordinates | 1281848..1282822 (+) | Length | 324 a.a. |
| NCBI ID | WP_060551125.1 | Uniprot ID | - |
| Organism | Staphylococcus agnetis strain IVB6177 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1276848..1287822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA84_RS06195 (MUA84_06190) | rpmG | 1277381..1277545 (+) | 165 | WP_256903594.1 | 50S ribosomal protein L33 | - |
| MUA84_RS06200 (MUA84_06195) | - | 1277658..1278197 (+) | 540 | WP_262617572.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA84_RS06205 (MUA84_06200) | - | 1278215..1279654 (+) | 1440 | WP_262617573.1 | rhomboid family intramembrane serine protease | - |
| MUA84_RS06210 (MUA84_06205) | - | 1279656..1279859 (+) | 204 | WP_037567684.1 | YqgQ family protein | - |
| MUA84_RS06215 (MUA84_06210) | - | 1279856..1280842 (+) | 987 | WP_060551128.1 | ROK family glucokinase | - |
| MUA84_RS06220 (MUA84_06215) | - | 1280843..1281154 (+) | 312 | WP_037567688.1 | MTH1187 family thiamine-binding protein | - |
| MUA84_RS06225 (MUA84_06220) | - | 1281169..1281792 (+) | 624 | WP_262617574.1 | MBL fold metallo-hydrolase | - |
| MUA84_RS06230 (MUA84_06225) | comGA | 1281848..1282822 (+) | 975 | WP_060551125.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA84_RS06235 (MUA84_06230) | comGB | 1282791..1283858 (+) | 1068 | WP_262617575.1 | competence type IV pilus assembly protein ComGB | - |
| MUA84_RS06240 (MUA84_06235) | comGC | 1283879..1284190 (+) | 312 | WP_262619484.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA84_RS06245 (MUA84_06240) | comGD | 1284180..1284611 (+) | 432 | WP_262617576.1 | competence type IV pilus minor pilin ComGD | - |
| MUA84_RS06250 (MUA84_06245) | - | 1284803..1285285 (+) | 483 | WP_262617577.1 | competence type IV pilus minor pilin ComGF | - |
| MUA84_RS06255 (MUA84_06250) | - | 1285269..1285466 (+) | 198 | WP_262619525.1 | hypothetical protein | - |
| MUA84_RS06260 (MUA84_06255) | - | 1285405..1285974 (+) | 570 | WP_262619485.1 | shikimate kinase | - |
| MUA84_RS06265 (MUA84_06260) | gcvT | 1286126..1287217 (+) | 1092 | WP_262617578.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36974.82 Da Isoelectric Point: 7.8369
>NTDB_id=673109 MUA84_RS06230 WP_060551125.1 1281848..1282822(+) (comGA) [Staphylococcus agnetis strain IVB6177]
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=673109 MUA84_RS06230 WP_060551125.1 1281848..1282822(+) (comGA) [Staphylococcus agnetis strain IVB6177]
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGCGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATATTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGTGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTATTGTTA
CGATTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATACAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAATTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGCGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATATTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGTGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTATTGTTA
CGATTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATACAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAATTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |